RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 AIFM3Q96NN9 605 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 SPTLC2O15270 562 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 GRIN3BO60391 1043 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 PLA2G6O60733 806 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 DTNBO60941 627 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 CAP2P40123 477 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 PRELPP51888 382 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 RASA3Q14644 834 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 CMTR1Q8N1G2 835 aaKnown RBP11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 TMX2Q9Y320 296 aa11.86□□□□□ -0.51
SNORD88C-201ENST00000408061 PNMA6FA0A0J9YX94 578 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 USP17L5A8MUK1 530 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 CTAGE5O15320 804 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 CYTH3O43739 400 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 PPFIA3O75145 1194 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 GADD45BO75293 160 aaPredicted RBP11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 ORC2Q13416 577 aaPredicted RBP11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 SEPT2Q15019 361 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 SLFN13Q68D06 897 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 CAVIN1Q6NZI2 390 aaKnown RBP11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 BLIDQ8IZY5 108 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 ZMYND12Q9H0C1 365 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 PCDHA4Q9UN74 947 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 KCNJ14Q9UNX9 436 aa11.85□□□□□ -0.51
SNORD88C-201ENST00000408061 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 F5H6K3 240 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 GH2P01242 217 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 SLC1A4P43007 532 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 ME1P48163 572 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 FOSBP53539 338 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 KLRC3Q07444 240 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 SUPT20HL1Q3ZLR7 823 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 SIAH1Q8IUQ4 282 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 TEPSINQ96N21 525 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 TMEM39BQ9GZU3 492 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 GJB4Q9NTQ9 266 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 PNMA2Q9UL42 364 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 ZBTB21Q9ULJ3 1066 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 ZNF541Q9H0D2 1346 aa11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 BAZ2BQ9UIF8 2168 aaKnown RBP11.84□□□□□ -0.51
SNORD88C-201ENST00000408061 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 STXBP3O00186 592 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 CUTAO60888 179 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 CMA1P23946 247 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 ATP2B2Q01814 1243 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 ZSCAN23Q3MJ62 389 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 CCDC73Q6ZRK6 1079 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 KRT25Q7Z3Z0 450 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 LRRC47Q8N1G4 583 aaKnown RBP11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 CHURC1Q8WUH1 139 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 TNFRSF25Q93038 417 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 CHAMP1Q96JM3 812 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 TMEM63CQ9P1W3 806 aa11.83□□□□□ -0.52
SNORD88C-201ENST00000408061 FAM237AA0A1B0GTK4 181 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 PHF20L1A8MW92 1017 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 LAD1O00515 517 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 ZBTB5O15062 677 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 BMP3P12645 472 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 NAPAP54920 295 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 PTPAQ15257 358 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 NPY5RQ15761 445 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 CCDC96Q2M329 555 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 TBC1D10BQ4KMP7 808 aaPredicted RBP11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 FAM160B2Q86V87 743 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 LPAR1Q92633 364 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 FERMT2Q96AC1 680 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms