RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 PLEKHG3A1L390 1219 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 HMGB1P1B2RPK0 211 aaPredicted RBP24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 PRLRP16471 622 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 TRAF1Q13077 416 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 TMED8Q6PL24 325 aaPredicted RBP24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 STK11IPQ8N1F8 1099 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 MICAL1Q8TDZ2 1067 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 LMBR1Q8WVP7 490 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 SPDL1Q96EA4 605 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 LRRC1Q9BTT6 524 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 OSBPL7Q9BZF2 842 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 SH3BP1Q9Y3L3 701 aa24.95■■□□□ 1.59
CUEDC1-202ENST00000407144 DNM1LO00429 736 aa24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 PRC1O43663 620 aa24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 SNUPNO95149 360 aaKnown RBP24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 SEMA3FQ13275 785 aa24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 MREGQ8N565 214 aa24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 PURBQ96QR8 312 aaKnown RBP24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 KIF9Q9HAQ2 790 aa24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 STIM2Q9P246 746 aa24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 FBXO2Q9UK22 296 aaPredicted RBP24.95■■□□□ 1.58
CUEDC1-202ENST00000407144 N4BP3O15049 544 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 GHRP10912 638 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 IBSPP21815 317 aaPredicted RBP24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 CREG2Q8IUH2 290 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 ARFGAP2Q8N6H7 521 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 OR8K1Q8NGG5 319 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 BCL9LQ86UU0 1499 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 ACEP12821 1306 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 EME2A4GXA9 379 aaPredicted RBP24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 ZNF185O15231 689 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 ANXA1P04083 346 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 SEC24CP53992 1094 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 KRT31Q15323 416 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 WASHC4Q2M389 1173 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 CFAP58Q5T655 872 aa24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 MB21D2Q8IYB1 491 aaPredicted RBP24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 CCDC47Q96A33 483 aaKnown RBP24.94■■□□□ 1.58
CUEDC1-202ENST00000407144 TOPAZ1Q8N9V7 1692 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 E7EVH7 732 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 PES1O00541 588 aaKnown RBP24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 CD44P16070 742 aaKnown RBP24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 KCTD16Q68DU8 428 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 ARMC9Q7Z3E5 817 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 HDAC7Q8WUI4 952 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 ATP6V1G3Q96LB4 118 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 DNAJC7Q99615 494 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 NDUFB9Q9Y6M9 179 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 SCTRP47872 440 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 SNX12Q9UMY4 172 aa24.93■■□□□ 1.58
CUEDC1-202ENST00000407144 ZNF233A6NK53 670 aa24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 PPP1R12BO60237 982 aaPredicted RBP24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 KRT14P02533 472 aa24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 RPSAP08865 295 aaKnown RBP24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 PECAM1P16284 738 aaPredicted RBP24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 PIP4K2AP48426 406 aaPredicted RBP24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 COPB1P53618 953 aaKnown RBP24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 NBPF5PQ86XG9 351 aaPredicted RBP24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 SPATA4Q8NEY3 305 aa24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 CCHCR1Q8TD31 782 aa24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 SEC31BQ9NQW1 1179 aa24.92■■□□□ 1.58
CUEDC1-202ENST00000407144 ATP6V1G2O95670 118 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 IDEP14735 1019 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 PRPHP41219 470 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 STX17P56962 302 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 ITGB3BPQ13352 177 aaPredicted RBP24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 GMNCA6NCL1 334 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 C5orf60A6NFR6 353 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 PPP1R3GB7ZBB8 358 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 CDC25AP30304 524 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 VAV2P52735 878 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 EZH2Q15910 746 aaKnown RBP24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 GRAMD1CQ8IYS0 662 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 KLHDC4Q8TBB5 520 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 CUL5Q93034 780 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 JADE2Q9NQC1 790 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 CPDO75976 1380 aa24.91■■□□□ 1.58
CUEDC1-202ENST00000407144 LIN7AO14910 233 aaPredicted RBP24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 SKAP2O75563 359 aaPredicted RBP24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 SSBP05455 408 aaKnown RBP eCLIP24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 TFCP2Q12800 502 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 RIPK1Q13546 671 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 TRIM29Q14134 588 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 KLHL10Q6JEL2 608 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 KIRREL3Q8IZU9 778 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 GSDMAQ96QA5 445 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 DBNDD2Q9BQY9 259 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 KDM4CQ9H3R0 1056 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 NOD2Q9HC29 1040 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 A1BGP04217 495 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 CCT6AP40227 531 aaKnown RBP24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 AIFM3Q96NN9 605 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 TRPC6Q9Y210 931 aa24.9■■□□□ 1.58
CUEDC1-202ENST00000407144 MAST3O60307 1309 aa24.89■■□□□ 1.58
CUEDC1-202ENST00000407144 HAUS3Q68CZ6 603 aa24.89■■□□□ 1.58
CUEDC1-202ENST00000407144 BZW1Q7L1Q6 419 aaKnown RBP24.89■■□□□ 1.58
CUEDC1-202ENST00000407144 SH3RF1Q7Z6J0 888 aa24.89■■□□□ 1.58
CUEDC1-202ENST00000407144 SPAG5Q96R06 1193 aa24.89■■□□□ 1.58
CUEDC1-202ENST00000407144 CPSF2Q9P2I0 782 aaKnown RBP24.89■■□□□ 1.58
CUEDC1-202ENST00000407144 RIPOR2Q9Y4F9 1068 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms