RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
PDE4D-206ENST00000405053 BMP3P12645 472 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 VCAM1P19320 739 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 RXRAP19793 462 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 CDC27P30260 824 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 SLC1A4P43007 532 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 GNAQP50148 359 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 GTF2A2P52657 109 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 ST3GAL1Q11201 340 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 SCRN1Q12765 414 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
PDE4D-206ENST00000405053 RTN1Q16799 776 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
PDE4D-206ENST00000405053 FASTKD5Q7L8L6 764 aaKnown RBP12.6□□□□□ -0.39
PDE4D-206ENST00000405053 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 HSCBQ8IWL3 235 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
PDE4D-206ENST00000405053 CHMP4CQ96CF2 233 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 SLKQ9H2G2 1235 aaPredicted RBP12.6□□□□□ -0.39
PDE4D-206ENST00000405053 TMOD4Q9NZQ9 345 aa12.6□□□□□ -0.39
PDE4D-206ENST00000405053 DHX16O60231 1041 aaKnown RBP12.59□□□□□ -0.39
PDE4D-206ENST00000405053 CETPP11597 493 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 HOXA7P31268 230 aaPredicted RBP12.59□□□□□ -0.39
PDE4D-206ENST00000405053 ADD1P35611 737 aaKnown RBP12.59□□□□□ -0.39
PDE4D-206ENST00000405053 FUT2Q10981 343 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 DGKZQ13574 1117 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 CUL4AQ13619 759 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 NTRK3Q16288 839 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 RAB11FIP4Q86YS3 637 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 STAG2Q8N3U4 1231 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 LZTS2Q9BRK4 669 aa12.59□□□□□ -0.39
PDE4D-206ENST00000405053 NCOA5Q9HCD5 579 aaKnown RBP12.59□□□□□ -0.39
PDE4D-206ENST00000405053 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
PDE4D-206ENST00000405053 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
PDE4D-206ENST00000405053 KLRF2D3W0D1 207 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 IFNAR1P17181 557 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
PDE4D-206ENST00000405053 CCT2P78371 535 aaKnown RBP12.58□□□□□ -0.4
PDE4D-206ENST00000405053 STK3Q13188 491 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 CCDC96Q2M329 555 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 FAM83BQ5T0W9 1011 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 KCTD1Q719H9 257 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 CCDC144CPQ8IYA2 1237 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 NECAB1Q8N987 351 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 BRI3BPQ8WY22 251 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-206ENST00000405053 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
PDE4D-206ENST00000405053 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 MTMR7Q9Y216 660 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 SLC45A1Q9Y2W3 748 aa12.58□□□□□ -0.4
PDE4D-206ENST00000405053 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 TMEM232C9JQI7 657 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 RAD21O60216 631 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 PLEKHA8P1O95397 391 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 STAT2P52630 851 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 INHBEP58166 350 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 BECN1Q14457 450 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 SLC35G1Q2M3R5 365 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 TTBK2Q6IQ55 1244 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 CATSPERGQ6ZRH7 1159 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 NBPF11Q86T75 865 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
PDE4D-206ENST00000405053 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
PDE4D-206ENST00000405053 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
PDE4D-206ENST00000405053 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 FRMPD2Q68DX3 1309 aaPredicted RBP12.57□□□□□ -0.4
PDE4D-206ENST00000405053 MYPNQ86TC9 1320 aa12.57□□□□□ -0.4
PDE4D-206ENST00000405053 CCL15-CCL14A0A0B4J2E2 113 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CPLX1O14810 134 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CYTH3O43739 400 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CDKL5O76039 1030 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CTDNEP1O95476 244 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
PDE4D-206ENST00000405053 NOGQ13253 232 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 PABPC4Q13310 644 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CCL15Q16663 113 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
PDE4D-206ENST00000405053 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms