RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 CEP131Q9UPN4 1083 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PATL2C9JE40 543 aaKnown RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PPFIA4O75335 1185 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 AMPD2Q01433 879 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 SGMS1Q86VZ5 419 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 TRIML1Q8N9V2 468 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PPM1EQ8WY54 764 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 HPS3Q969F9 1004 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 CENPHQ9H3R5 247 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 RIPOR2Q9Y4F9 1068 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 NWD2Q9ULI1 1742 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 TNKSO95271 1327 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 ESYT3A0FGR9 886 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 GOLGA6BA6NDN3 693 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 MYO1BO43795 1136 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 NAP1L1P55209 391 aaKnown RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 HERVK_113P62684 666 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 GNGT1P63211 74 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 RASGRF1Q13972 1273 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 FAM76AQ8TAV0 307 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 KAT2BQ92831 832 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 C5P01031 1676 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 PDCLQ13371 301 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 MAP9Q49MG5 647 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 TTC38Q5R3I4 469 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 AEBP2Q6ZN18 517 aaPredicted RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 OR8K1Q8NGG5 319 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 COG1Q8WTW3 980 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 JAG2Q9Y219 1238 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 MARF1Q9Y4F3 1742 aaKnown RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 AFDNP55196 1824 aaKnown RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 NCK2O43639 380 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 KRT2P35908 639 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 CCDC96Q2M329 555 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 IQUBQ8NA54 791 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 LRRC1Q9BTT6 524 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 MLXIPQ9HAP2 919 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
SMC1B-202ENST00000404354 FAM169AQ9Y6X4 670 aa10.75□□□□□ -0.69
SMC1B-202ENST00000404354 AGPSO00116 658 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 IRS4O14654 1257 aaPredicted RBP10.74□□□□□ -0.69
SMC1B-202ENST00000404354 ERLIN2O94905 339 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 LIFRP42702 1097 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 IRAK1P51617 712 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 TADA2BQ86TJ2 420 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 SPATA5Q8NB90 893 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 MED4Q9NPJ6 270 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 ASAP1Q9ULH1 1129 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 SOS2Q07890 1332 aaPredicted RBP10.74□□□□□ -0.69
SMC1B-202ENST00000404354 H0YHG0 523 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 EBAG9O00559 213 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 PRPF6O94906 941 aaKnown RBP10.74□□□□□ -0.69
SMC1B-202ENST00000404354 PDE8BO95263 885 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 IPO7O95373 1038 aaKnown RBP10.74□□□□□ -0.69
SMC1B-202ENST00000404354 NLRP5P59047 1200 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 TRAPPC11Q7Z392 1133 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 SPATA20Q8TB22 786 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 ARL8AQ96BM9 186 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 CDHR2Q9BYE9 1310 aa10.74□□□□□ -0.69
SMC1B-202ENST00000404354 UBE3CQ15386 1083 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 WDR59Q6PJI9 974 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 IFT81Q8WYA0 676 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 GSDMAQ96QA5 445 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 LRWD1Q9UFC0 647 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 ZSCAN5CA6NGD5 496 aaPredicted RBP10.73□□□□□ -0.69
SMC1B-202ENST00000404354 KRT14P02533 472 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 IL17AQ16552 155 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 ANKRD18AQ8IVF6 992 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 GPKOWQ92917 476 aaPredicted RBP eCLIP10.73□□□□□ -0.69
SMC1B-202ENST00000404354 UIMC1Q96RL1 719 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 AATFQ9NY61 560 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMC1B-202ENST00000404354 BACH1O14867 736 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 CYP7A1P22680 504 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 NFRKBQ6P4R8 1299 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMC1B-202ENST00000404354 NACAP1Q9BZK3 213 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 KRT23Q9C075 422 aa10.73□□□□□ -0.69
SMC1B-202ENST00000404354 TCRBV5S4A2TA0A5A2 114 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 MYO1FO00160 1098 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 MOCS3O95396 460 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 RPN1P04843 607 aaKnown RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 XBP1P17861 261 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 STAT6P42226 847 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 DYNLL1P63167 89 aaKnown RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 PKN1Q16512 942 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 TMC4Q7Z404 712 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 ADGRA1Q86SQ6 560 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 IRF2BP1Q8IU81 584 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 MS4A14Q96JA4 679 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 CAPS2Q9BXY5 557 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms