RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 LRRC41Q15345 812 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 FAM47AQ5JRC9 791 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 CLEC10AQ8IUN9 316 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 CLASRPQ8N2M8 674 aaKnown RBP21.57■■□□□ 1.04
HDAC11-204ENST00000404040 LCORLQ8N3X6 602 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 ATG4CQ96DT6 458 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 LRRCC1Q9C099 1032 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 IL1RAPL2Q9NP60 686 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 ZBTB47Q9UFB7 747 aaPredicted RBP21.57■■□□□ 1.04
HDAC11-204ENST00000404040 SWAP70Q9UH65 585 aa21.57■■□□□ 1.04
HDAC11-204ENST00000404040 C1orf53Q5VUE5 145 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 NCAPG2Q86XI2 1143 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 BADQ92934 168 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 MAML3Q96JK9 1138 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 ARHGEF10LQ9HCE6 1279 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 TMX2Q9Y320 296 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 ROBO3Q96MS0 1386 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 MYH4Q9Y623 1939 aa21.56■■□□□ 1.04
HDAC11-204ENST00000404040 MYO9BQ13459 2157 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 ADCYAP1R1P41586 468 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 ICA1Q05084 483 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 PRAMEF19Q5SWL8 479 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 SIAH1Q8IUQ4 282 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 SPICE1Q8N0Z3 855 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.55■■□□□ 1.04
HDAC11-204ENST00000404040 CDX2Q99626 313 aaPredicted RBP21.55■■□□□ 1.04
HDAC11-204ENST00000404040 SH2D4AQ9H788 454 aa21.55■■□□□ 1.04
HDAC11-204ENST00000404040 TRIM43BA6NCK2 446 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 GOLIM4O00461 696 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 FCER1AP12319 257 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 AKR1B1P15121 316 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 SH3RF1Q7Z6J0 888 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 FERMT2Q96AC1 680 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 TRIM43Q96BQ3 446 aaPredicted RBP21.54■■□□□ 1.04
HDAC11-204ENST00000404040 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 DNAJC2Q99543 621 aaKnown RBP21.54■■□□□ 1.04
HDAC11-204ENST00000404040 VCPKMTQ9H867 229 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 PHF24Q9UPV7 400 aa21.54■■□□□ 1.04
HDAC11-204ENST00000404040 APBB1O00213 710 aa21.53■■□□□ 1.04
HDAC11-204ENST00000404040 WDR46O15213 610 aaKnown RBP21.53■■□□□ 1.04
HDAC11-204ENST00000404040 SMAD3P84022 425 aaKnown RBP21.53■■□□□ 1.04
HDAC11-204ENST00000404040 TMEM132BQ14DG7 1078 aa21.53■■□□□ 1.04
HDAC11-204ENST00000404040 SEMA6BQ9H3T3 888 aa21.53■■□□□ 1.04
HDAC11-204ENST00000404040 NRBP1Q9UHY1 535 aa21.53■■□□□ 1.04
HDAC11-204ENST00000404040 SLC25A27O95847 323 aa21.52■■□□□ 1.04
HDAC11-204ENST00000404040 MAFAQ8NHW3 353 aaPredicted RBP21.52■■□□□ 1.04
HDAC11-204ENST00000404040 TTYH1Q9H313 450 aaPredicted RBP21.52■■□□□ 1.04
HDAC11-204ENST00000404040 ARMT1Q9H993 441 aa21.52■■□□□ 1.04
HDAC11-204ENST00000404040 XPNPEP3Q9NQH7 507 aa21.52■■□□□ 1.04
HDAC11-204ENST00000404040 IFIT2P09913 472 aaKnown RBP21.51■■□□□ 1.03
HDAC11-204ENST00000404040 RARBP10826 455 aa21.51■■□□□ 1.03
HDAC11-204ENST00000404040 TLE2Q04725 743 aa21.51■■□□□ 1.03
HDAC11-204ENST00000404040 SAMD1Q6SPF0 538 aaPredicted RBP21.51■■□□□ 1.03
HDAC11-204ENST00000404040 MMP19Q99542 508 aa21.51■■□□□ 1.03
HDAC11-204ENST00000404040 ADAMTS5Q9UNA0 930 aa21.51■■□□□ 1.03
HDAC11-204ENST00000404040 PRKAB2O43741 272 aa21.5■■□□□ 1.03
HDAC11-204ENST00000404040 MBD4O95243 580 aa21.5■■□□□ 1.03
HDAC11-204ENST00000404040 SMC5Q8IY18 1101 aa21.5■■□□□ 1.03
HDAC11-204ENST00000404040 CCDC17Q96LX7 622 aa21.5■■□□□ 1.03
HDAC11-204ENST00000404040 ATP8A2Q9NTI2 1148 aa21.5■■□□□ 1.03
HDAC11-204ENST00000404040 PGK2P07205 417 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 CLTBP09497 229 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 ITGB8P26012 769 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 RIOX2Q8IUF8 465 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 MYLIPQ8WY64 445 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 TINF2Q9BSI4 451 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 FBXO28Q9NVF7 368 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 TACC3Q9Y6A5 838 aa21.49■■□□□ 1.03
HDAC11-204ENST00000404040 CYP2D7A0A087X1C5 515 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 SMIM22K7EJ46 135 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 PGK1P00558 417 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 IGHDP01880 384 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 ADD2P35612 726 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 CDK8P49336 464 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 SLFNL1Q499Z3 407 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 C12orf60Q5U649 245 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 C16orf86Q6ZW13 317 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 RNF180Q86T96 592 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 PAG1Q9NWQ8 432 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 DIS3Q9Y2L1 958 aaKnown RBP21.48■■□□□ 1.03
HDAC11-204ENST00000404040 NCOR1O75376 2440 aa21.48■■□□□ 1.03
HDAC11-204ENST00000404040 A0A1W2PQ45 241 aaPredicted RBP21.47■■□□□ 1.03
HDAC11-204ENST00000404040 A0A1W2PQY0 241 aa21.47■■□□□ 1.03
HDAC11-204ENST00000404040 KIAA0355O15063 1070 aa21.47■■□□□ 1.03
HDAC11-204ENST00000404040 EEF2P13639 858 aaKnown RBP21.47■■□□□ 1.03
HDAC11-204ENST00000404040 TAL1P17542 331 aaPredicted RBP21.47■■□□□ 1.03
HDAC11-204ENST00000404040 KCTD2Q14681 263 aa21.47■■□□□ 1.03
HDAC11-204ENST00000404040 ZNF792Q3KQV3 632 aa21.47■■□□□ 1.03
HDAC11-204ENST00000404040 RNPC3Q96LT9 517 aaKnown RBP21.47■■□□□ 1.03
HDAC11-204ENST00000404040 ZNF214Q9UL59 606 aaPredicted RBP21.47■■□□□ 1.03
HDAC11-204ENST00000404040 PPP1R9AQ9ULJ8 1098 aa21.47■■□□□ 1.03
HDAC11-204ENST00000404040 GBF1Q92538 1859 aa21.47■■□□□ 1.03
HDAC11-204ENST00000404040 TMEM265A0A087WTH1 108 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 VWA5AO00534 786 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 PQBP1O60828 265 aaKnown RBP21.46■■□□□ 1.03
HDAC11-204ENST00000404040 AKR1A1P14550 325 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 FOSL2P15408 326 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 COPB2P35606 906 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 EPHB4P54760 987 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 ANKRD45Q5TZF3 282 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms