RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SPICE1Q8N0Z3 855 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TMEM57Q8N5G2 664 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TANGO6Q9C0B7 1094 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 FBXO28Q9NVF7 368 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 NOP58Q9Y2X3 529 aaKnown RBP14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MYADML2A6NDP7 307 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 IGSF3O75054 1194 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SURF6O75683 361 aaKnown RBP14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 AKR1B1P15121 316 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 RAG1P15918 1043 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 FPGSQ05932 587 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PLS1Q14651 629 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ZNF792Q3KQV3 632 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SLFNL1Q499Z3 407 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 CCSAPQ6IQ19 270 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ANKRD33Q7Z3H0 272 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 DYNLL2Q96FJ2 89 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MROH8Q9H579 483 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TBX21Q9UL17 535 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PIEZO1Q92508 2521 aa14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TCF20Q9UGU0 1960 aaKnown RBP14.49□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MCM3APO60318 1980 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TMEM240Q5SV17 173 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 RASIP1Q5U651 963 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 REPS2Q8NFH8 660 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SDR42E1Q8WUS8 393 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PPM1EQ8WY54 764 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TIFAQ96CG3 184 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TINF2Q9BSI4 451 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PBX4Q9BYU1 374 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PRDM12Q9H4Q4 367 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TMEM39AQ9NV64 488 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ADAMTS5Q9UNA0 930 aa14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 BAZ2AQ9UIF9 1905 aaKnown RBP14.48□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ROBO3Q96MS0 1386 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 GBF1Q92538 1859 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ADCY6O43306 1168 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 FLOT1O75955 427 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 RARBP10826 455 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MB21D1Q8N884 522 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 KLHDC9Q8NEP7 349 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TMX2Q9Y320 296 aa14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 BRWD1Q9NSI6 2320 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TCRBV5S4A2TA0A5A2 114 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SNAI1O95863 264 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TIMP1P01033 207 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 CHGBP05060 677 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 FCER1AP12319 257 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ACLYP53396 1101 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 LCORLQ8N3X6 602 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 FRAT1Q92837 279 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TOX2Q96NM4 488 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MMP19Q99542 508 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 VCPKMTQ9H867 229 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 DCP1AQ9NPI6 582 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MCM9Q9NXL9 1143 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 NRBP1Q9UHY1 535 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 MYH8P13535 1937 aa14.46□□□□□ -0.09
SPTLC1P3-201ENST00000403408 CYP2D7A0A087X1C5 515 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 MAGEB6P1A0A0J9YX57 407 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 PRKAB2O43741 272 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ACRP10323 421 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 PDE6AP16499 860 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CDK7P50613 346 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 KCNA10Q16322 511 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 TMEM179Q6ZVK1 233 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 RNF180Q86T96 592 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 NECAB3Q96P71 396 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ASB2Q96Q27 587 aa14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ZNF214Q9UL59 606 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CSF2RAP15509 400 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CCDC85BQ15834 202 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 MFSD5Q6N075 450 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CERS3Q8IU89 383 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 RIOX2Q8IUF8 465 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ADAMTS19Q8TE59 1207 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 FGD4Q96M96 766 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 SLC5A4Q9NY91 659 aa14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CXXC1Q9P0U4 656 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 DIS3Q9Y2L1 958 aaKnown RBP14.44□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ZNF532Q9HCE3 1301 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 VWA5AO00534 786 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 CTAGE5O15320 804 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 SLC25A27O95847 323 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 RLBP1P12271 317 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 AKR1A1P14550 325 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 ICA1Q05084 483 aa14.43□□□□□ -0.1
SPTLC1P3-201ENST00000403408 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms