RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 HOXA10P31260 410 aaPredicted RBP22.48■■□□□ 1.19
CCDC47-202ENST00000403162 SMC1AQ14683 1233 aaKnown RBP22.48■■□□□ 1.19
CCDC47-202ENST00000403162 CMTR1Q8N1G2 835 aaKnown RBP22.48■■□□□ 1.19
CCDC47-202ENST00000403162 IGSF22Q8N9C0 903 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 FUT8Q9BYC5 575 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 MINPP1Q9UNW1 487 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 A0A087X0B3 334 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 POLR3GO15318 223 aaPredicted RBP22.48■■□□□ 1.19
CCDC47-202ENST00000403162 RBL2Q08999 1139 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 TUBB2AQ13885 445 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 BRD3Q15059 726 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 RAD9BQ6WBX8 426 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 GSDMAQ96QA5 445 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 TUBB2BQ9BVA1 445 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
CCDC47-202ENST00000403162 BMP15O95972 392 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 SRGNP10124 158 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 CD44P16070 742 aaKnown RBP22.47■■□□□ 1.19
CCDC47-202ENST00000403162 XBP1P17861 261 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 ATP2B1P20020 1258 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 FECHP22830 423 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 OAS2P29728 719 aaKnown RBP22.47■■□□□ 1.19
CCDC47-202ENST00000403162 SRGAP1Q7Z6B7 1085 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 NUP133Q8WUM0 1156 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 PAGE5Q96GU1 130 aa22.47■■□□□ 1.19
CCDC47-202ENST00000403162 MFAP3LO75121 409 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 RASGRP2Q7LDG7 609 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 FERMT2Q96AC1 680 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 CCDC51Q96ER9 411 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 CRAMP1Q96RY5 1269 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 UBAC1Q9BSL1 405 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 NPR1P16066 1061 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 CHMP4BP1P59074 171 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 DPYDQ12882 1025 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 SEC23AQ15436 765 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 SHISA4Q96DD7 197 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 PHF20Q9BVI0 1012 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 ITIH6Q6UXX5 1313 aa22.46■■□□□ 1.19
CCDC47-202ENST00000403162 SNAP23O00161 211 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 KIF5CO60282 957 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 PPARAQ07869 468 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 FILIP1LQ4L180 1135 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 TXLNBQ8N3L3 684 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 CEP112Q8N8E3 955 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 EPSTI1Q96J88 318 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 IRX2Q9BZI1 471 aaPredicted RBP22.45■■□□□ 1.18
CCDC47-202ENST00000403162 CDC23Q9UJX2 597 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 KRT2P35908 639 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 TUBB4BP68371 445 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 AKAP17AQ02040 695 aaKnown RBP22.45■■□□□ 1.18
CCDC47-202ENST00000403162 CNGA4Q8IV77 575 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 LZTFL1Q9NQ48 299 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 ANAPC4Q9UJX5 808 aa22.45■■□□□ 1.18
CCDC47-202ENST00000403162 MYH2Q9UKX2 1941 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 PPP1R3GB7ZBB8 358 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 H0YIN7 160 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 POTEB2H3BUK9 544 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 POLD1P28340 1107 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 AFMP43652 599 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 PKN1Q16512 942 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 LONRF2Q1L5Z9 754 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 HNRNPLLQ8WVV9 542 aaKnown RBP22.44■■□□□ 1.18
CCDC47-202ENST00000403162 SYMPKQ92797 1274 aaKnown RBP22.44■■□□□ 1.18
CCDC47-202ENST00000403162 MASTLQ96GX5 879 aa22.44■■□□□ 1.18
CCDC47-202ENST00000403162 FAM205CA6NFA0 338 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 BBOX1O75936 387 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 KLHL10Q6JEL2 608 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 ZNF622Q969S3 477 aaKnown RBP eCLIP22.43■■□□□ 1.185e-8■■■■□ 19.9
CCDC47-202ENST00000403162 TNKSO95271 1327 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 MAP2K7O14733 419 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 HNRNPH2P55795 449 aaKnown RBP22.43■■□□□ 1.18
CCDC47-202ENST00000403162 STX17P56962 302 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 FUT2Q10981 343 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 ESR2Q92731 530 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 ANKRD2Q9GZV1 360 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 VPS54Q9P1Q0 977 aa22.43■■□□□ 1.18
CCDC47-202ENST00000403162 PRPF3O43395 683 aaKnown RBP22.42■■□□□ 1.18
CCDC47-202ENST00000403162 COL11A2P13942 1736 aaPredicted RBP22.42■■□□□ 1.18
CCDC47-202ENST00000403162 GPS2Q13227 327 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 SLC51AQ86UW1 340 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 TTF2Q9UNY4 1162 aaKnown RBP22.42■■□□□ 1.18
CCDC47-202ENST00000403162 GYPCP04921 128 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 CHRNA5P30532 468 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 USP5P45974 858 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 EARS2Q5JPH6 523 aaKnown RBP22.42■■□□□ 1.18
CCDC47-202ENST00000403162 MSANTD4Q8NCY6 345 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 RAB21Q9UL25 225 aa22.42■■□□□ 1.18
CCDC47-202ENST00000403162 C10orf71Q711Q0 1435 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 ALDH1B1P30837 517 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 CASP14P31944 242 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 MIGA1Q8NAN2 632 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 CPLX3Q8WVH0 158 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 ANKZF1Q9H8Y5 726 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 DLEC1Q9Y238 1755 aa22.41■■□□□ 1.18
CCDC47-202ENST00000403162 PPEF1O14829 653 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-202ENST00000403162 MSL3Q8N5Y2 521 aaKnown RBP22.4■■□□□ 1.18
CCDC47-202ENST00000403162 ZCCHC17Q9NP64 241 aaKnown RBP22.4■■□□□ 1.18
CCDC47-202ENST00000403162 ANKIB1Q9P2G1 1089 aa22.4■■□□□ 1.18
CCDC47-202ENST00000403162 DUOX1Q9NRD9 1551 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms