RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 FKBP5Q13451 457 aaPredicted RBP7.08□□□□□ -1.28
CLIP4-202ENST00000401605 ZNF394Q53GI3 561 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 G2E3Q7L622 706 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 SAPCD2Q86UD0 394 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 SLF2Q8IX21 1173 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 C1orf131Q8NDD1 294 aaKnown RBP7.08□□□□□ -1.28
CLIP4-202ENST00000401605 HHIPL1Q96JK4 782 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 CAPNS2Q96L46 248 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 GPR101Q96P66 508 aaPredicted RBP7.08□□□□□ -1.28
CLIP4-202ENST00000401605 SLX1AQ9BQ83 275 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 RTL9Q8NET4 1388 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 DUOX1Q9NRD9 1551 aa7.08□□□□□ -1.28
CLIP4-202ENST00000401605 A0A1B0GUL7 405 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 H7C1W4 665 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 VAMP4O75379 141 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 GNL2Q13823 731 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 GCKRQ14397 625 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 TERF2Q15554 542 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 SAMD7Q7Z3H4 446 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 UBE3BQ7Z3V4 1068 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 PODNQ7Z5L7 613 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 CATIPQ7Z7H3 387 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 C11orf96Q7Z7L8 435 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 LINS1Q8NG48 757 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 DNAAF4Q8WXU2 420 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 SYAP1Q96A49 352 aaPredicted RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 GREM2Q9H772 168 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 KCNQ5Q9NR82 932 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 INPP5FQ9Y2H2 1132 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 LTBP1Q14766 1721 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 IGHMBP2P38935 993 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 NR1H3Q13133 447 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 LARP1BQ659C4 914 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 MCTP2Q6DN12 878 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 CYP4F22Q6NT55 531 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 TTC30AQ86WT1 665 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 SULF1Q8IWU6 871 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 SUGP1Q8IWZ8 645 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 EFCAB13Q8IY85 973 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 PDCD7Q8N8D1 485 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 AGBL3Q8NEM8 1001 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 CCDC47Q96A33 483 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 SH3GL3Q99963 347 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 PLA2G12BQ9BX93 195 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 TMEM121BQ9BXQ6 578 aaPredicted RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 METTL5Q9NRN9 209 aaKnown RBP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 TMOD4Q9NZQ9 345 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 BLOC1S6Q9UL45 172 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 RABL2BQ9UNT1 228 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 MINPP1Q9UNW1 487 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLIP4-202ENST00000401605 CACNA1SQ13698 1873 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 CCDC88AQ3V6T2 1871 aa7.07□□□□□ -1.28
CLIP4-202ENST00000401605 SORBS3O60504 671 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 TPPPO94811 219 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 VCAM1P19320 739 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 RACK1P63244 317 aaKnown RBP7.06□□□□□ -1.28
CLIP4-202ENST00000401605 EXOSC9Q06265 439 aaKnown RBP7.06□□□□□ -1.28
CLIP4-202ENST00000401605 GRM1Q13255 1194 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 MTMR2Q13614 643 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 KIF4BQ2VIQ3 1234 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 OTUD6AQ7L8S5 288 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 USP48Q86UV5 1035 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 VPS37AQ8NEZ2 397 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 BHMTQ93088 406 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 DCPSQ96C86 337 aaKnown RBP7.06□□□□□ -1.28
CLIP4-202ENST00000401605 PPP1R9BQ96SB3 815 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 SENP7Q9BQF6 1050 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 SEZ6LQ9BYH1 1024 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 VTI1BQ9UEU0 232 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 KIAA1024Q9UPX6 916 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 EGFRP00533 1210 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 SESN3P58005 492 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 AMPD3Q01432 767 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 NFXL1Q6ZNB6 911 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 NCAPG2Q86XI2 1143 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 PNMA1Q8ND90 353 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 CEP89Q96ST8 783 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 AKAP2Q9Y2D5 859 aa7.06□□□□□ -1.28
CLIP4-202ENST00000401605 MED23Q9ULK4 1368 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 LDHBP07195 334 aaKnown RBP7.05□□□□□ -1.28
CLIP4-202ENST00000401605 CSF1RP07333 972 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 XBP1P17861 261 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 ITGA6P23229 1130 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 CCT4P50991 539 aaKnown RBP7.05□□□□□ -1.28
CLIP4-202ENST00000401605 LBX1P52954 281 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 CASP7P55210 303 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 ZNF280AP59817 542 aaPredicted RBP7.05□□□□□ -1.28
CLIP4-202ENST00000401605 CBLBQ13191 982 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 TMED1Q13445 227 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 C4orf46Q504U0 113 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 RBM12BQ8IXT5 1001 aaKnown RBP7.05□□□□□ -1.28
CLIP4-202ENST00000401605 ELOA2Q8IYF1 753 aaPredicted RBP7.05□□□□□ -1.28
CLIP4-202ENST00000401605 PDILTQ8N807 584 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 CCDC34Q96HJ3 373 aa7.05□□□□□ -1.28
CLIP4-202ENST00000401605 MPHOSPH8Q99549 860 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms