RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 NEDD1Q8NHV4 660 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 RILPL2Q969X0 211 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 APBA2Q99767 749 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 FLRT1Q9NZU1 646 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.88■□□□□ 0.61
ATG4B-203ENST00000400772 RAD21O60216 631 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 NDUFB10O96000 172 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 SLC3A2P08195 630 aaKnown RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 ERCC3P19447 782 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 TFAP4Q01664 338 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 CACNB2Q08289 660 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 TMEM132BQ14DG7 1078 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 PARP14Q460N5 1801 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 TRMT44Q8IYL2 757 aaKnown RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 SHCBP1Q8NEM2 672 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 NPLOC4Q8TAT6 608 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 PLIN4Q96Q06 1357 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 NUP88Q99567 741 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 HMX1Q9NP08 348 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-203ENST00000400772 ANAPC4Q9UJX5 808 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
ATG4B-203ENST00000400772 IGHA2P01877 340 aa18.86■□□□□ 0.61
ATG4B-203ENST00000400772 FGAP02671 866 aa18.86■□□□□ 0.61
ATG4B-203ENST00000400772 HOXC6P09630 235 aa18.86■□□□□ 0.61
ATG4B-203ENST00000400772 SDSP20132 328 aa18.86■□□□□ 0.61
ATG4B-203ENST00000400772 REPS2Q8NFH8 660 aa18.86■□□□□ 0.61
ATG4B-203ENST00000400772 VWA5AO00534 786 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-203ENST00000400772 TTLL1O95922 423 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 TSPY3P0CV98 308 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 TSPY8P0CW00 308 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 HSPD1P10809 573 aaKnown RBP18.85■□□□□ 0.61
ATG4B-203ENST00000400772 CAPN2P17655 700 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 PDE4AP27815 886 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 PLS1Q14651 629 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 IVNS1ABPQ9Y6Y0 642 aa18.85■□□□□ 0.61
ATG4B-203ENST00000400772 STRNO43815 780 aa18.84■□□□□ 0.61
ATG4B-203ENST00000400772 FGRP09769 529 aa18.84■□□□□ 0.61
ATG4B-203ENST00000400772 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-203ENST00000400772 NCAPG2Q86XI2 1143 aa18.84■□□□□ 0.61
ATG4B-203ENST00000400772 MROH8Q9H579 483 aa18.84■□□□□ 0.61
ATG4B-203ENST00000400772 IL17RBQ9NRM6 502 aa18.84■□□□□ 0.61
ATG4B-203ENST00000400772 SYNPO2Q9UMS6 1093 aa18.84■□□□□ 0.61
ATG4B-203ENST00000400772 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.61
ATG4B-203ENST00000400772 COBLO75128 1261 aa18.83■□□□□ 0.6
ATG4B-203ENST00000400772 ADORA2AP29274 412 aa18.83■□□□□ 0.6
ATG4B-203ENST00000400772 MNX1P50219 401 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-203ENST00000400772 LRRC47Q8N1G4 583 aaKnown RBP18.83■□□□□ 0.6
ATG4B-203ENST00000400772 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.6
ATG4B-203ENST00000400772 ZNF214Q9UL59 606 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-203ENST00000400772 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 COL11A1P12107 1806 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-203ENST00000400772 NMT2O60551 498 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 SLC25A27O95847 323 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 STAT3P40763 770 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 LHX8Q68G74 356 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 RIOX2Q8IUF8 465 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 DIS3LQ8TF46 1054 aaKnown RBP18.82■□□□□ 0.6
ATG4B-203ENST00000400772 OGDHLQ9ULD0 1010 aa18.82■□□□□ 0.6
ATG4B-203ENST00000400772 ZMYM6O95789 1325 aa18.81■□□□□ 0.6
ATG4B-203ENST00000400772 ORC4O43929 436 aa18.81■□□□□ 0.6
ATG4B-203ENST00000400772 NOVP48745 357 aa18.81■□□□□ 0.6
ATG4B-203ENST00000400772 SLFN13Q68D06 897 aa18.81■□□□□ 0.6
ATG4B-203ENST00000400772 DPP9Q86TI2 863 aa18.81■□□□□ 0.6
ATG4B-203ENST00000400772 ABRAQ8N0Z2 381 aa18.81■□□□□ 0.6
ATG4B-203ENST00000400772 PAWRQ96IZ0 340 aaKnown RBP18.81■□□□□ 0.6
ATG4B-203ENST00000400772 TSPY2A6NKD2 308 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 RANBP6O60518 1105 aaKnown RBP18.8■□□□□ 0.6
ATG4B-203ENST00000400772 CYP2C19P33261 490 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 MFSD14CQ5VZR4 134 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
ATG4B-203ENST00000400772 ANKLE1Q8NAG6 615 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 PRPF38AQ8NAV1 312 aaKnown RBP18.8■□□□□ 0.6
ATG4B-203ENST00000400772 TRPV1Q8NER1 839 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 DPF3Q92784 378 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
ATG4B-203ENST00000400772 ZNF236Q9UL36 1845 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 H0YGN5 161 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 HAND2P61296 217 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 OLFML2BQ68BL8 750 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 HTATIP2Q9BUP3 242 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 FEM1BQ9UK73 627 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 RIPK3Q9Y572 518 aa18.79■□□□□ 0.6
ATG4B-203ENST00000400772 FCER1AP12319 257 aa18.78■□□□□ 0.6
ATG4B-203ENST00000400772 BMP3P12645 472 aa18.78■□□□□ 0.6
ATG4B-203ENST00000400772 GSPT1P15170 499 aaKnown RBP18.78■□□□□ 0.6
ATG4B-203ENST00000400772 KIFC2Q96AC6 838 aa18.78■□□□□ 0.6
ATG4B-203ENST00000400772 MMP19Q99542 508 aa18.78■□□□□ 0.6
ATG4B-203ENST00000400772 STX8Q9UNK0 236 aa18.78■□□□□ 0.6
ATG4B-203ENST00000400772 ZNFX1Q9P2E3 1918 aaKnown RBP18.77■□□□□ 0.6
ATG4B-203ENST00000400772 ATP2A1O14983 1001 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 PGK2P07205 417 aa18.77■□□□□ 0.6
ATG4B-203ENST00000400772 MCCP23508 829 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms