RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 TBC1D16Q8TBP0 767 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 ENOX1Q8TC92 643 aaKnown RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 IL17RBQ9NRM6 502 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 PCDHA4Q9UN74 947 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
LINC00649-202ENST00000400353 SERPINC1P01008 464 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 SMARCA1P28370 1054 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 ERCC5P28715 1186 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-202ENST00000400353 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-202ENST00000400353 UBASH3AP57075 661 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 EVX2Q03828 476 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 EN1Q05925 392 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-202ENST00000400353 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
LINC00649-202ENST00000400353 SH3RF1Q7Z6J0 888 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 DYNLL2Q96FJ2 89 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 PAXBP1Q9Y5B6 917 aa12.24□□□□□ -0.45
LINC00649-202ENST00000400353 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 PLSCR1O15162 318 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 CCP110O43303 1012 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 RASA1P20936 1047 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00649-202ENST00000400353 ZNF174Q15697 407 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 ISM2Q6H9L7 571 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 MAPKAPK5Q8IW41 473 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 CCDC112Q8NEF3 446 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 NEDD1Q8NHV4 660 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 CCDC12Q8WUD4 166 aaPredicted RBP12.23□□□□□ -0.45
LINC00649-202ENST00000400353 COA1Q9GZY4 146 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 HSD3B7Q9H2F3 369 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
LINC00649-202ENST00000400353 TUBB4AP04350 444 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 LONP1P36776 959 aaKnown RBP12.23□□□□□ -0.45
LINC00649-202ENST00000400353 CDK8P49336 464 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 PLCD1P51178 756 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 DDR1Q08345 913 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 MFSD14BQ5SR56 506 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 DEFB132Q7Z7B7 95 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
LINC00649-202ENST00000400353 DHX58Q96C10 678 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 SPZ1Q9BXG8 430 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 MAD2L2Q9UI95 211 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 LTBP1Q14766 1721 aa12.23□□□□□ -0.45
LINC00649-202ENST00000400353 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
LINC00649-202ENST00000400353 FOXN1O15353 648 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 TNNT1P13805 278 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 FLT1P17948 1338 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 PTGDRQ13258 359 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 EZH2Q15910 746 aaKnown RBP12.22□□□□□ -0.45
LINC00649-202ENST00000400353 GRIK5Q16478 980 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 IQUBQ8NA54 791 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 GPR101Q96P66 508 aaPredicted RBP12.22□□□□□ -0.45
LINC00649-202ENST00000400353 GSDMAQ96QA5 445 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 EYA3Q99504 573 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 PSDA5PKW4 1024 aaPredicted RBP12.22□□□□□ -0.45
LINC00649-202ENST00000400353 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 TXLNAP40222 546 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 VSTM4Q8IW00 320 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 PDILTQ8N807 584 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 SAP30BPQ9UHR5 308 aaKnown RBP12.22□□□□□ -0.45
LINC00649-202ENST00000400353 ATP6V0A2Q9Y487 856 aa12.22□□□□□ -0.45
LINC00649-202ENST00000400353 SNED1Q8TER0 1413 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 PLIN4Q96Q06 1357 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 USP17L3A6NCW0 530 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 USP17L4A6NCW7 530 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 LAD1O00515 517 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
LINC00649-202ENST00000400353 BMP6P22004 513 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 NOVP48745 357 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 PSEN1P49768 467 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 RHBDL3P58872 404 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.45
LINC00649-202ENST00000400353 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 FANCLQ9NW38 375 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 BARHL2Q9NY43 387 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 CDK5RAP2Q96SN8 1893 aa12.21□□□□□ -0.45
LINC00649-202ENST00000400353 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.46
LINC00649-202ENST00000400353 QSER1Q2KHR3 1735 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 VWA3AA6NCI4 1184 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
LINC00649-202ENST00000400353 NPR1P16066 1061 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 SF3B2Q13435 895 aaKnown RBP12.2□□□□□ -0.46
LINC00649-202ENST00000400353 ARID5BQ14865 1188 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 ZNF827Q17R98 1081 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 USP49Q70CQ1 688 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
LINC00649-202ENST00000400353 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
LINC00649-202ENST00000400353 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms