RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
USP16-204ENST00000399976 SCAF8Q9UPN6 1271 aaKnown RBP8.83□□□□□ -1
USP16-204ENST00000399976 PDHXO00330 501 aa8.82□□□□□ -1
USP16-204ENST00000399976 RANBP6O60518 1105 aaKnown RBP8.82□□□□□ -1
USP16-204ENST00000399976 KDM4AO75164 1064 aa8.82□□□□□ -1
USP16-204ENST00000399976 SLC25A27O95847 323 aa8.82□□□□□ -1
USP16-204ENST00000399976 RPS6KB1P23443 525 aa8.82□□□□□ -1
USP16-204ENST00000399976 COG2Q14746 738 aa8.82□□□□□ -1
USP16-204ENST00000399976 RAB3GAP1Q15042 981 aa8.82□□□□□ -1
USP16-204ENST00000399976 PKN2Q16513 984 aaKnown RBP8.82□□□□□ -1
USP16-204ENST00000399976 RUFY3Q7L099 469 aa8.82□□□□□ -1
USP16-204ENST00000399976 TRMT44Q8IYL2 757 aaKnown RBP8.82□□□□□ -1
USP16-204ENST00000399976 REPS2Q8NFH8 660 aa8.82□□□□□ -1
USP16-204ENST00000399976 TMEM47Q9BQJ4 181 aa8.82□□□□□ -1
USP16-204ENST00000399976 LY9Q9HBG7 655 aa8.82□□□□□ -1
USP16-204ENST00000399976 PPP1R9AQ9ULJ8 1098 aa8.82□□□□□ -1
USP16-204ENST00000399976 B4E1Z4 1266 aa8.82□□□□□ -1
USP16-204ENST00000399976 F5H6K3 240 aa8.82□□□□□ -1
USP16-204ENST00000399976 MPHOSPH10O00566 681 aaKnown RBP8.82□□□□□ -1
USP16-204ENST00000399976 NDUFB10O96000 172 aa8.82□□□□□ -1
USP16-204ENST00000399976 KLRC3Q07444 240 aa8.82□□□□□ -1
USP16-204ENST00000399976 ZNF543Q08ER8 600 aa8.82□□□□□ -1
USP16-204ENST00000399976 PRPF38AQ8NAV1 312 aaKnown RBP8.82□□□□□ -1
USP16-204ENST00000399976 ERO1AQ96HE7 468 aa8.82□□□□□ -1
USP16-204ENST00000399976 FEZ1Q99689 392 aa8.82□□□□□ -1
USP16-204ENST00000399976 SPZ1Q9BXG8 430 aa8.82□□□□□ -1
USP16-204ENST00000399976 PALM3A6NDB9 673 aaPredicted RBP8.82□□□□□ -1
USP16-204ENST00000399976 PDHBP11177 359 aa8.82□□□□□ -1
USP16-204ENST00000399976 BMP3P12645 472 aa8.82□□□□□ -1
USP16-204ENST00000399976 WTAPQ15007 396 aa8.82□□□□□ -1
USP16-204ENST00000399976 CYB5R4Q7L1T6 521 aa8.82□□□□□ -1
USP16-204ENST00000399976 FAM43AQ8N2R8 423 aa8.82□□□□□ -1
USP16-204ENST00000399976 ZNF274Q96GC6 653 aaPredicted RBP8.82□□□□□ -1
USP16-204ENST00000399976 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
USP16-204ENST00000399976 BACH2Q9BYV9 841 aa8.82□□□□□ -1
USP16-204ENST00000399976 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
USP16-204ENST00000399976 RANBP17Q9H2T7 1088 aaKnown RBP8.82□□□□□ -1
USP16-204ENST00000399976 KAT14Q9H8E8 782 aa8.82□□□□□ -1
USP16-204ENST00000399976 AOC2O75106 756 aa8.81□□□□□ -1
USP16-204ENST00000399976 HMGCS2P54868 508 aa8.81□□□□□ -1
USP16-204ENST00000399976 CCNA1P78396 465 aa8.81□□□□□ -1
USP16-204ENST00000399976 TROAPQ12815 778 aa8.81□□□□□ -1
USP16-204ENST00000399976 PRKG1Q13976 671 aa8.81□□□□□ -1
USP16-204ENST00000399976 IFIT1BQ5T764 474 aaKnown RBP8.81□□□□□ -1
USP16-204ENST00000399976 SLFN13Q68D06 897 aa8.81□□□□□ -1
USP16-204ENST00000399976 BLOC1S2Q6QNY1 142 aa8.81□□□□□ -1
USP16-204ENST00000399976 ACER1Q8TDN7 264 aa8.81□□□□□ -1
USP16-204ENST00000399976 SLF1Q9BQI6 1058 aa8.81□□□□□ -1
USP16-204ENST00000399976 UPF2Q9HAU5 1272 aaKnown RBP8.81□□□□□ -1
USP16-204ENST00000399976 PRC1O43663 620 aa8.81□□□□□ -1
USP16-204ENST00000399976 HSPA8P11142 646 aaKnown RBP8.81□□□□□ -1
USP16-204ENST00000399976 MAPK4P31152 587 aa8.81□□□□□ -1
USP16-204ENST00000399976 KIF5BP33176 963 aa8.81□□□□□ -1
USP16-204ENST00000399976 HAND2P61296 217 aa8.81□□□□□ -1
USP16-204ENST00000399976 RASEFQ8IZ41 740 aa8.81□□□□□ -1
USP16-204ENST00000399976 MSL3Q8N5Y2 521 aaKnown RBP8.81□□□□□ -1
USP16-204ENST00000399976 PNMA1Q8ND90 353 aa8.81□□□□□ -1
USP16-204ENST00000399976 CNKSR2Q8WXI2 1034 aa8.81□□□□□ -1
USP16-204ENST00000399976 BCL11AQ9H165 835 aa8.81□□□□□ -1
USP16-204ENST00000399976 MROH8Q9H579 483 aa8.81□□□□□ -1
USP16-204ENST00000399976 RPAP3Q9H6T3 665 aaPredicted RBP8.81□□□□□ -1
USP16-204ENST00000399976 CLIP2Q9UDT6 1046 aa8.81□□□□□ -1
USP16-204ENST00000399976 TRIM75PA6NK02 468 aa8.8□□□□□ -1
USP16-204ENST00000399976 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
USP16-204ENST00000399976 SMIM22K7EJ46 135 aa8.8□□□□□ -1
USP16-204ENST00000399976 MCM2P49736 904 aa8.8□□□□□ -1
USP16-204ENST00000399976 STAT2P52630 851 aa8.8□□□□□ -1
USP16-204ENST00000399976 HERVK_113P62684 666 aa8.8□□□□□ -1
USP16-204ENST00000399976 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
USP16-204ENST00000399976 SKAP1Q86WV1 359 aa8.8□□□□□ -1
USP16-204ENST00000399976 RIOX2Q8IUF8 465 aa8.8□□□□□ -1
USP16-204ENST00000399976 RIOX1Q9H6W3 641 aa8.8□□□□□ -1
USP16-204ENST00000399976 SLC38A10Q9HBR0 1119 aa8.8□□□□□ -1
USP16-204ENST00000399976 FBXO40Q9UH90 709 aa8.8□□□□□ -1
USP16-204ENST00000399976 NRBP1Q9UHY1 535 aa8.8□□□□□ -1
USP16-204ENST00000399976 FZD1Q9UP38 647 aa8.8□□□□□ -1
USP16-204ENST00000399976 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
USP16-204ENST00000399976 CYP46A1Q9Y6A2 500 aa8.8□□□□□ -1
USP16-204ENST00000399976 CCDC196A0A1B0GTZ2 297 aa8.8□□□□□ -1
USP16-204ENST00000399976 STRNO43815 780 aa8.8□□□□□ -1
USP16-204ENST00000399976 IGHA2P01877 340 aa8.8□□□□□ -1
USP16-204ENST00000399976 IRX3P78415 501 aaPredicted RBP8.8□□□□□ -1
USP16-204ENST00000399976 FAM47AQ5JRC9 791 aa8.8□□□□□ -1
USP16-204ENST00000399976 TREML2Q5T2D2 321 aa8.8□□□□□ -1
USP16-204ENST00000399976 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
USP16-204ENST00000399976 CATIPQ7Z7H3 387 aa8.8□□□□□ -1
USP16-204ENST00000399976 CHST13Q8NET6 341 aa8.8□□□□□ -1
USP16-204ENST00000399976 TBC1D32Q96NH3 1257 aa8.8□□□□□ -1
USP16-204ENST00000399976 FKTNO75072 461 aa8.79□□□□□ -1
USP16-204ENST00000399976 PRDM1O75626 825 aa8.79□□□□□ -1
USP16-204ENST00000399976 CNMDO75829 334 aa8.79□□□□□ -1
USP16-204ENST00000399976 CRHR2Q13324 411 aa8.79□□□□□ -1
USP16-204ENST00000399976 TMEM67Q5HYA8 995 aa8.79□□□□□ -1
USP16-204ENST00000399976 GADL1Q6ZQY3 521 aa8.79□□□□□ -1
USP16-204ENST00000399976 ZNF467Q7Z7K2 595 aaPredicted RBP8.79□□□□□ -1
USP16-204ENST00000399976 SOCS4Q8WXH5 440 aa8.79□□□□□ -1
USP16-204ENST00000399976 STK36Q9NRP7 1315 aa8.79□□□□□ -1
USP16-204ENST00000399976 GPR25O00155 361 aa8.79□□□□□ -1
USP16-204ENST00000399976 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
USP16-204ENST00000399976 HOXC6P09630 235 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms