RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 SMARCA1P28370 1054 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 NLRP5P59047 1200 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 SHROOM1Q2M3G4 852 aaPredicted RBP9.91□□□□□ -0.82
LINC02449-202ENST00000399866 CERKLQ49MI3 558 aaPredicted RBP9.91□□□□□ -0.82
LINC02449-202ENST00000399866 AXDND1Q5T1B0 1012 aaPredicted RBP9.91□□□□□ -0.82
LINC02449-202ENST00000399866 FKBP1CQ5VVH2 108 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 RBM43Q6ZSC3 357 aaKnown RBP9.91□□□□□ -0.82
LINC02449-202ENST00000399866 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 HEATR3Q7Z4Q2 680 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 ENGASEQ8NFI3 743 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 CCDC148Q8NFR7 591 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 FAM151AQ8WW52 585 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 RRP36Q96EU6 259 aaKnown RBP9.91□□□□□ -0.82
LINC02449-202ENST00000399866 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 FUCA2Q9BTY2 467 aa9.91□□□□□ -0.82
LINC02449-202ENST00000399866 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
LINC02449-202ENST00000399866 CUTAO60888 179 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 GDF11O95390 407 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 CMA1P23946 247 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 MMP14P50281 582 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 ZNF280AP59817 542 aaPredicted RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 ICA1Q05084 483 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 ZNF543Q08ER8 600 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 SNW1Q13573 536 aaKnown RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 CAMK4Q16566 473 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 ABCB5Q2M3G0 1257 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 EARS2Q5JPH6 523 aaKnown RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 BLIDQ8IZY5 108 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 FMR1NBQ8N0W7 255 aaPredicted RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 DAGLBQ8NCG7 672 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 KANSL2Q9H9L4 492 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 VEZTQ9HBM0 779 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 CABP5Q9NP86 173 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 MYOZ2Q9NPC6 264 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 BARHL2Q9NY43 387 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 NYAP2Q9P242 653 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 PCDHA4Q9UN74 947 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 CEP131Q9UPN4 1083 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 PCDHB6Q9Y5E3 794 aa9.9□□□□□ -0.82
LINC02449-202ENST00000399866 MORC2Q9Y6X9 1032 aaPredicted RBP9.9□□□□□ -0.82
LINC02449-202ENST00000399866 MYH4Q9Y623 1939 aa9.9□□□□□ -0.83
LINC02449-202ENST00000399866 A0A1B0GVL5 298 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 SHTN1A0MZ66 631 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 TRIM75PA6NK02 468 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 hCG_1984214I3L0E3 225 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 ADAMTS3O15072 1205 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 CTAGE5O15320 804 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 MYO1BO43795 1136 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 KINO60870 393 aaKnown RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 PFKFB1P16118 471 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 PRELPP51888 382 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 NDUFA8P51970 172 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 SEPT2Q15019 361 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 CCDC96Q2M329 555 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 NOM1Q5C9Z4 860 aaKnown RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 RBM26Q5T8P6 1007 aaKnown RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 GALNT17Q6IS24 598 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 FAM83AQ86UY5 434 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 ZNF713Q8N859 430 aaPredicted RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 CCDC12Q8WUD4 166 aaPredicted RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 DCAF4Q8WV16 495 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 MKL1Q969V6 931 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 PIGSQ96S52 555 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 UBA5Q9GZZ9 404 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 RIOX1Q9H6W3 641 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
LINC02449-202ENST00000399866 SEC63Q9UGP8 760 aaKnown RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 FBXO2Q9UK22 296 aaPredicted RBP9.89□□□□□ -0.83
LINC02449-202ENST00000399866 FAM237AA0A1B0GTK4 181 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 M0R2N6 131 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 FZD9O00144 591 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 WNT10BO00744 389 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 BMP15O95972 392 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 GH2P01242 217 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 CCDC192P0DO97 292 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 ATP2B1P20020 1258 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 TRAPPC10P48553 1259 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 GMPSP49915 693 aaPredicted RBP9.88□□□□□ -0.83
LINC02449-202ENST00000399866 NAPAP54920 295 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 JAG1P78504 1218 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 TYRO3Q06418 890 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 RRP1BQ14684 758 aaKnown RBP9.88□□□□□ -0.83
LINC02449-202ENST00000399866 TTC38Q5R3I4 469 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 GPATCH4Q5T3I0 446 aaKnown RBP9.88□□□□□ -0.83
LINC02449-202ENST00000399866 RESP18Q5W5W9 173 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 SHC4Q6S5L8 630 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 PIK3AP1Q6ZUJ8 805 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 CKAP2LQ8IYA6 745 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
LINC02449-202ENST00000399866 HPSEQ9Y251 543 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms