RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 PDE8AO60658 829 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 ECE1P42892 770 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 BLZF1Q9H2G9 400 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 MRPL46Q9H2W6 279 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 LMNB1P20700 586 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 PDE6CP51160 858 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 PRKG1Q13976 671 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 DPP8Q6V1X1 898 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
CACNA1C-219ENST00000399649 N4BP1O75113 896 aaKnown RBP13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 ATP6V1E1P36543 226 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 TMTC4Q5T4D3 741 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 DNAJC8O75937 253 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 SERPINB6P35237 376 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 LIG4P49917 911 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 PPP2R5BQ15173 497 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 RAB44Q7Z6P3 723 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 APPBP2Q92624 585 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 GLG1Q92896 1179 aa13.52□□□□□ -0.24
CACNA1C-219ENST00000399649 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 TSTA3Q13630 321 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 RDH13Q8NBN7 331 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 MIS12Q9H081 205 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 XAB2Q9HCS7 855 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 DDX41Q9UJV9 622 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 H0YIN7 160 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 KRIT1O00522 736 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 SAT1P21673 171 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 PDE6BP35913 854 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 CYP2J2P51589 502 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 GAS7O60861 476 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 STAT1P42224 750 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 NME8Q8N427 588 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 HOMER3Q9NSC5 361 aa13.52□□□□□ -0.25
CACNA1C-219ENST00000399649 GPAA1O43292 621 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 MX2P20592 715 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ANKRD20A8PQ5CZ79 823 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 FAM47CQ5HY64 1035 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ANKRD20A2Q5SQ80 823 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ANKRD20A1Q5TYW2 823 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 FAF1Q9UNN5 650 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 THAP12O43422 761 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 CPA1P15085 419 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ANGPTL3Q9Y5C1 460 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ORC6Q9Y5N6 252 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 FLT4P35916 1363 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 PLBD2Q8NHP8 589 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 FAM207AQ9NSI2 230 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 RIPOR2Q9Y4F9 1068 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 KCNK3O14649 394 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 NCOA5Q9HCD5 579 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 IBTKQ9P2D0 1353 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 EYA2O00167 538 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 IFNB1P01574 187 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 ATF2P15336 505 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 TCP10Q12799 353 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 PPP2R5AQ15172 486 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 PPP2R5EQ16537 467 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 TRIM58Q8NG06 486 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 NLRP7Q8WX94 980 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 SAR1BQ9Y6B6 198 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 KDRP35968 1356 aa13.51□□□□□ -0.25
CACNA1C-219ENST00000399649 HIP1RO75146 1068 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 CCDC51Q96ER9 411 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 THEGQ9P2T0 379 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 ABCB4P21439 1286 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 GNGT1P63211 74 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 GABPB1Q06547 395 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 GPBP1Q86WP2 473 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 SMCR8Q8TEV9 937 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 CDKL2Q92772 493 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 C1orf112Q9NSG2 853 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 KIF22Q14807 665 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 BBOF1Q8ND07 529 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 CFAP61Q8NHU2 1237 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 GOLGA5Q8TBA6 731 aa13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1C-219ENST00000399649 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms