RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 CTAGE15A4D2H0 777 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 INO80B-WBP1J3KQ70 363 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 ZEB2O60315 1214 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 CTAGE8P0CG41 777 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 PRPHP41219 470 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 BRINP3Q76B58 766 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 CTAGE6Q86UF2 777 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 CTAGE4Q8IX94 777 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 INO80BQ9C086 356 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 SUDS3Q9H7L9 328 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 USP17L3A6NCW0 530 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 USP17L4A6NCW7 530 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 CHL1O00533 1208 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 USP17L1Q7RTZ2 530 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 OTUD5Q96G74 571 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 FBF1Q8TES7 1133 aa15.33■□□□□ 0.04
CACNA1C-211ENST00000399617 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 ZSCAN30Q86W11 494 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 COA7Q96BR5 231 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 DISC1Q9NRI5 854 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 SNAP23O00161 211 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 USP26Q9BXU7 913 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 RIOK3O14730 519 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 TNNC2P02585 160 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 ABCB4P21439 1286 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 TMOD1P28289 359 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 CUL4BQ13620 913 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 PRAMEF18Q5VWM3 479 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 MTERF2Q49AM1 385 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 CAPN12Q6ZSI9 719 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 CEP57Q86XR8 500 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 EHBP1Q8NDI1 1231 aa15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-211ENST00000399617 TNKSO95271 1327 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 ELP1O95163 1332 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 TPD52P55327 224 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 PNOCQ13519 176 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 KRT81Q14533 505 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 FAM160B1Q5W0V3 765 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 PI4K2BQ8TCG2 481 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 PALLDQ8WX93 1383 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 CTAGE9A4FU28 777 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 PCIF1Q9H4Z3 704 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 NME8Q8N427 588 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 UBE2SQ16763 222 aa15.31■□□□□ 0.04
CACNA1C-211ENST00000399617 KIF2AO00139 706 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 KRT83P78385 493 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 CCDC77Q9BR77 488 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 FAM207AQ9NSI2 230 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 STIM2Q9P246 746 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 KRT86O43790 486 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 SRGAP2CP0DJJ0 459 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 ZNF577Q9BSK1 485 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 ANTXR1Q9H6X2 564 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 NRBP2Q9NSY0 501 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 PCDHA12Q9UN75 941 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 CCDC6Q16204 474 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 MOSPD1Q9UJG1 213 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 ZHX2Q9Y6X8 837 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 ADD1P35611 737 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 M0R2C6 588 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 TMEM191BP0C7N4 346 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 HLFQ16534 295 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 RILPL1Q5EBL4 403 aa15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 ADAT2Q7Z6V5 191 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 LSM14BQ9BX40 385 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-211ENST00000399617 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 PTH1RQ03431 593 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 TBC1D9BQ66K14 1250 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 SPATA17Q96L03 361 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 SERTAD1Q9UHV2 236 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 RAD50Q92878 1312 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 RSPH3Q86UC2 560 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 C7orf31Q8N865 590 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 GIMAP7Q8NHV1 300 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 MASTLQ96GX5 879 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 MLH3Q9UHC1 1453 aa15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-211ENST00000399617 PIK3CAP42336 1068 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms