RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ATG4CQ96DT6 458 aa21.96■■□□□ 1.11
UFD1-202ENST00000399523 UHRF1Q96T88 793 aaPredicted RBP21.96■■□□□ 1.11
UFD1-202ENST00000399523 TBX21Q9UL17 535 aa21.96■■□□□ 1.11
UFD1-202ENST00000399523 FLOT1O75955 427 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 AKR1A1P14550 325 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 ACLYP53396 1101 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
UFD1-202ENST00000399523 MAP3K12Q12852 859 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 TMEM240Q5SV17 173 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 NUP133Q8WUM0 1156 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 STARD7Q9NQZ5 370 aa21.95■■□□□ 1.1
UFD1-202ENST00000399523 DBNLQ9UJU6 430 aaKnown RBP21.95■■□□□ 1.1
UFD1-202ENST00000399523 PARP14Q460N5 1801 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 GRXCR1A8MXD5 290 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 PPIGQ13427 754 aaKnown RBP eCLIP21.94■■□□□ 1.11e-6■■■□□ 18
UFD1-202ENST00000399523 POLA2Q14181 598 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 ADGRE1Q14246 886 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 TMEM132BQ14DG7 1078 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 ZNF792Q3KQV3 632 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 CCDC174Q6PII3 467 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 RIOK1Q9BRS2 568 aaKnown RBP21.94■■□□□ 1.1
UFD1-202ENST00000399523 ADAMTS5Q9UNA0 930 aa21.94■■□□□ 1.1
UFD1-202ENST00000399523 MOXD2PA6NHM9 499 aa21.93■■□□□ 1.1
UFD1-202ENST00000399523 MPHOSPH10O00566 681 aaKnown RBP21.93■■□□□ 1.1
UFD1-202ENST00000399523 POLR3DP05423 398 aaPredicted RBP21.93■■□□□ 1.1
UFD1-202ENST00000399523 PGK2P07205 417 aa21.93■■□□□ 1.1
UFD1-202ENST00000399523 CCSAPQ6IQ19 270 aaPredicted RBP21.93■■□□□ 1.1
UFD1-202ENST00000399523 SIAH1Q8IUQ4 282 aa21.93■■□□□ 1.1
UFD1-202ENST00000399523 KLHDC9Q8NEP7 349 aa21.93■■□□□ 1.1
UFD1-202ENST00000399523 MMP19Q99542 508 aa21.93■■□□□ 1.1
UFD1-202ENST00000399523 CCDC129Q6ZRS4 1044 aa21.92■■□□□ 1.1
UFD1-202ENST00000399523 TMEM179Q6ZVK1 233 aa21.92■■□□□ 1.1
UFD1-202ENST00000399523 LENG1Q96BZ8 264 aaPredicted RBP21.92■■□□□ 1.1
UFD1-202ENST00000399523 TLR7Q9NYK1 1049 aaKnown RBP21.92■■□□□ 1.1
UFD1-202ENST00000399523 TMX2Q9Y320 296 aa21.92■■□□□ 1.1
UFD1-202ENST00000399523 COL11A1P12107 1806 aaPredicted RBP21.92■■□□□ 1.1
UFD1-202ENST00000399523 XIRP2A4UGR9 3374 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 SYNRGQ9UMZ2 1314 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 HOXD11P31277 338 aaPredicted RBP21.91■■□□□ 1.1
UFD1-202ENST00000399523 CDK7P50613 346 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 EVX2Q03828 476 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 OS9Q13438 667 aaPredicted RBP21.91■■□□□ 1.1
UFD1-202ENST00000399523 RIOX2Q8IUF8 465 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 SSH3Q8TE77 659 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 REV3LO60673 3130 aa21.91■■□□□ 1.1
UFD1-202ENST00000399523 NAV1Q8NEY1 1877 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 ELP1O95163 1332 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 MROH7Q68CQ1 1323 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 KCTD2Q14681 263 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 CCDC85BQ15834 202 aaPredicted RBP21.9■■□□□ 1.1
UFD1-202ENST00000399523 KCNA10Q16322 511 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 SPICE1Q8N0Z3 855 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 ANTXR1Q9H6X2 564 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 VCPKMTQ9H867 229 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 CNPY2Q9Y2B0 182 aa21.9■■□□□ 1.1
UFD1-202ENST00000399523 TCF20Q9UGU0 1960 aaKnown RBP21.9■■□□□ 1.1
UFD1-202ENST00000399523 WDR46O15213 610 aaKnown RBP21.89■■□□□ 1.09
UFD1-202ENST00000399523 SURF6O75683 361 aaKnown RBP21.89■■□□□ 1.09
UFD1-202ENST00000399523 TRIM27P14373 513 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 CSF2RAP15509 400 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 RAB30Q15771 203 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 MSL3Q8N5Y2 521 aaKnown RBP21.89■■□□□ 1.09
UFD1-202ENST00000399523 IL27Q8NEV9 243 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 CCDC8Q9H0W5 538 aaPredicted RBP21.89■■□□□ 1.09
UFD1-202ENST00000399523 SH2D4AQ9H788 454 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 ARHGEF10LQ9HCE6 1279 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 MCM9Q9NXL9 1143 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 PIEZO1Q92508 2521 aa21.89■■□□□ 1.09
UFD1-202ENST00000399523 MAGEB6P1A0A0J9YX57 407 aa21.88■■□□□ 1.09
UFD1-202ENST00000399523 PSRC1Q6PGN9 363 aaPredicted RBP21.88■■□□□ 1.09
UFD1-202ENST00000399523 ZNF365Q70YC5 407 aa21.88■■□□□ 1.09
UFD1-202ENST00000399523 TMEM199Q8N511 208 aa21.88■■□□□ 1.09
UFD1-202ENST00000399523 EAF2Q96CJ1 260 aaPredicted RBP21.88■■□□□ 1.09
UFD1-202ENST00000399523 C1QTNF1Q9BXJ1 281 aa21.88■■□□□ 1.09
UFD1-202ENST00000399523 CXXC1Q9P0U4 656 aaPredicted RBP21.88■■□□□ 1.09
UFD1-202ENST00000399523 MSRAQ9UJ68 235 aa21.88■■□□□ 1.09
UFD1-202ENST00000399523 FAM184BQ9ULE4 1060 aa21.88■■□□□ 1.09
UFD1-202ENST00000399523 NOP58Q9Y2X3 529 aaKnown RBP21.88■■□□□ 1.09
UFD1-202ENST00000399523 IPO8O15397 1037 aaKnown RBP21.87■■□□□ 1.09
UFD1-202ENST00000399523 DUSP11O75319 330 aaKnown RBP21.87■■□□□ 1.09
UFD1-202ENST00000399523 BMP1P13497 986 aa21.87■■□□□ 1.09
UFD1-202ENST00000399523 IGFBP4P22692 258 aa21.87■■□□□ 1.09
UFD1-202ENST00000399523 CST5P28325 142 aaPredicted RBP21.87■■□□□ 1.09
UFD1-202ENST00000399523 STAT3P40763 770 aa21.87■■□□□ 1.09
UFD1-202ENST00000399523 ATP8B2P98198 1209 aa21.87■■□□□ 1.09
UFD1-202ENST00000399523 GLT1D1Q96MS3 346 aa21.87■■□□□ 1.09
UFD1-202ENST00000399523 CRNKL1Q9BZJ0 848 aaKnown RBP21.87■■□□□ 1.09
UFD1-202ENST00000399523 SWAP70Q9UH65 585 aa21.87■■□□□ 1.09
UFD1-202ENST00000399523 ARIH1Q9Y4X5 557 aaPredicted RBP21.87■■□□□ 1.09
UFD1-202ENST00000399523 SYNGAP1Q96PV0 1343 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 VWA5AO00534 786 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 SNAI1O95863 264 aaPredicted RBP21.86■■□□□ 1.09
UFD1-202ENST00000399523 ACRP10323 421 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 COPB2P35606 906 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 ICA1Q05084 483 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 SAMD1Q6SPF0 538 aaPredicted RBP21.86■■□□□ 1.09
UFD1-202ENST00000399523 CLEC10AQ8IUN9 316 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 HERVK_113Q902F9 699 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 ZNF214Q9UL59 606 aaPredicted RBP21.86■■□□□ 1.09
UFD1-202ENST00000399523 TNNQ9UQP3 1299 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms