RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HSD3B7Q9H2F3 369 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 hCG_1642624A0A1W2PR95 340 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 M0R2N6 131 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 CCP110O43303 1012 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SERPINC1P01008 464 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ZNF174Q15697 407 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PIK3AP1Q6ZUJ8 805 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SYMPKQ92797 1274 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SWAP70Q9UH65 585 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 STX8Q9UNK0 236 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 CCDC194A0A1B0GVG4 234 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MYL1P05976 194 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PARP1P09874 1014 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SFPQP23246 707 aaKnown RBP eCLIP20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 LMOD1P29536 600 aaPredicted RBP20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 GNA11P29992 359 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PRPHP41219 470 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 HHIPL2Q6UWX4 724 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
HLA-DQB1-204ENST00000399084 CDK5RAP2Q96SN8 1893 aa20.14■□□□□ 0.82
HLA-DQB1-204ENST00000399084 KLRF2D3W0D1 207 aa20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 FKBP1AP62942 108 aaKnown RBP20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CCZ1BP86790 482 aa20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CCZ1P86791 482 aaPredicted RBP20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PAGE5Q96GU1 130 aa20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ZMYND12Q9H0C1 365 aa20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 DAGLAQ9Y4D2 1042 aa20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 BRWD3Q6RI45 1802 aa20.14■□□□□ 0.81
HLA-DQB1-204ENST00000399084 FAM205CA6NFA0 338 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 RRP9O43818 475 aaKnown RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 BMP6P22004 513 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 GTF2IP78347 998 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 C17orf53Q8N3J3 647 aaPredicted RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 STAG2Q8N3U4 1231 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 DHX58Q96C10 678 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 RRP36Q96EU6 259 aaKnown RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 MASTLQ96GX5 879 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 GPR101Q96P66 508 aaPredicted RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SAP30BPQ9UHR5 308 aaKnown RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 FOCADQ5VW36 1801 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ESYT2A0FGR8 921 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PSDA5PKW4 1024 aaPredicted RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ZNF18P17022 549 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 KRT25Q7Z3Z0 450 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 TMC6Q7Z403 805 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PDILTQ8N807 584 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 GTPBP4Q9BZE4 634 aaKnown RBP20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 C6orf50Q9HD87 102 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 FANCLQ9NW38 375 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 RMND1Q9NWS8 449 aa20.13■□□□□ 0.81
HLA-DQB1-204ENST00000399084 QSER1Q2KHR3 1735 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 VWA3AA6NCI4 1184 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 STXBP3O00186 592 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 GABPAQ06546 454 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 DPYDQ12882 1025 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 TPD52L1Q16890 204 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ASPRV1Q53RT3 343 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ISM2Q6H9L7 571 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 USP49Q70CQ1 688 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PODNQ7Z5L7 613 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 C4orf32Q8N8J7 132 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 MYH1P12882 1939 aa20.12■□□□□ 0.81
HLA-DQB1-204ENST00000399084 FOXN1O15353 648 aa20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 HDLBPQ00341 1268 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CFAP100Q494V2 611 aa20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 DPP8Q6V1X1 898 aaPredicted RBP20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 VSTM4Q8IW00 320 aa20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 AK8Q96MA6 479 aa20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 MAGEF1Q9HAY2 307 aa20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SEC63Q9UGP8 760 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CYTH3O43739 400 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 GTPBP6O43824 516 aaPredicted RBP20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 MCM7P33993 719 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 E2F4Q16254 413 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SPATA1Q5VX52 437 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 WWC2Q6AWC2 1192 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 FCHSD1Q86WN1 690 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SLC44A5Q8NCS7 719 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CTAGE1Q96RT6 745 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CUEDC2Q9H467 287 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PCDHA6Q9UN73 950 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PCDHA8Q9Y5H6 950 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PRR29P0C7W0 189 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CDK11BP21127 795 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CCSER1Q9C0I3 900 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 RIOX1Q9H6W3 641 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 NFE2L3Q9Y4A8 694 aa20.1■□□□□ 0.81
HLA-DQB1-204ENST00000399084 ANKRD31Q8N7Z5 1873 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms