RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GOPCQ9HD26 462 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ZCCHC17Q9NP64 241 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 FBXO28Q9NVF7 368 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 RNF186Q9NXI6 227 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CYP2C8P10632 490 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PSMA5P28066 241 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 LIFRP42702 1097 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TOB2Q14106 344 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 FBXL16Q8N461 479 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CFHR5Q9BXR6 569 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 KAT14Q9H8E8 782 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 MTMR7Q9Y216 660 aa14.56□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L15C9J2P7 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L13C9JLJ4 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L11C9JVI0 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L18D6R9N7 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L22D6RA61 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L17D6RBQ6 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L19D6RCP7 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L20D6RJB6 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 RAD21O60216 631 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 USP17L24Q0WX57 530 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TROAPQ12815 778 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CRHR2Q13324 411 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SART3Q15020 963 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 Q6ZUG5 572 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SGMS1Q86VZ5 419 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 DCAF4Q8WV16 495 aa14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 P2RX7Q99572 595 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ERICH2A1L162 156 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SPDYE16A6NNV3 312 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CA12O43570 354 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PEX10O60683 326 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TRPA1O75762 1119 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TBC1D8O95759 1140 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 BMP3P12645 472 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SLC1A4P43007 532 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 MAP2K1Q02750 393 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ZNF543Q08ER8 600 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SLC35G1Q2M3R5 365 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TTBK2Q6IQ55 1244 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 KCTD1Q719H9 257 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ZNF654Q8IZM8 581 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 BRF1Q92994 677 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TANGO6Q9C0B7 1094 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SAGE1Q9NXZ1 904 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CYP46A1Q9Y6A2 500 aa14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 FRMPD2Q68DX3 1309 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 COL11A1P12107 1806 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CNMDO75829 334 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ALDH1A1P00352 501 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 HERVK_113P62684 666 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 OTUD7BQ6GQQ9 843 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 APOA5Q6Q788 366 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 RAB11FIP4Q86YS3 637 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 STAG2Q8N3U4 1231 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SP7Q8TDD2 431 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ATG4CQ96DT6 458 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PARK7Q99497 189 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TXNRD2Q9NNW7 524 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PPP1R9AQ9ULJ8 1098 aa14.53□□□□□ -0.08
HLA-DQB1-203ENST00000399082 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TMEM232C9JQI7 657 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TLR2O60603 784 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RXRAP19793 462 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 EVCP57679 992 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 IRX3P78415 501 aaPredicted RBP14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 APOBRQ0VD83 1088 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GRM4Q14833 912 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CCDC96Q2M329 555 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 C17orf99Q6UX52 265 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 BTNL9Q6UXG8 535 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 LBX2Q6XYB7 198 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GPCPD1Q9NPB8 672 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PDRG1Q9NUG6 133 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TSKSQ9UJT2 592 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PNMA3Q9UL41 463 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ADAMTS5Q9UNA0 930 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 HPS5Q9UPZ3 1129 aa14.52□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MYPNQ86TC9 1320 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 KLF18A0A0U1RQI7 1052 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PALM3A6NDB9 673 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FOXN1O15353 648 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PLA2G6O60733 806 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FLOT1O75955 427 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 DDAH1O94760 285 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 HSPA1AP0DMV8 641 aaKnown RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 HSPA1BP0DMV9 641 aaKnown RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 BCRP11274 1271 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 OSBPP22059 807 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms