RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ELNP15502 786 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 MAPK4P31152 587 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 GRK4P32298 578 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 GPR142Q7Z601 462 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 NBPF11Q86T75 865 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 RNF41Q9H4P4 317 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 ADCY3O60266 1144 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 PCP11498 1178 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 PLS1Q14651 629 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 WDR78Q5VTH9 848 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 SLFN13Q68D06 897 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 PPP1R9AQ9ULJ8 1098 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
HLA-DQB1-202ENST00000399079 NOVP48745 357 aa16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CCNA1P78396 465 aa16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 MOV10L1Q9BXT6 1211 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SPATC1LQ9H0A9 340 aa16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 BIN2Q9UBW5 565 aaPredicted RBP16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SYNPO2Q9UMS6 1093 aa16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ADAMTS5Q9UNA0 930 aa16.64■□□□□ 0.25
HLA-DQB1-202ENST00000399079 POTEFA5A3E0 1075 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 B4E1Z4 1266 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 VWA5AO00534 786 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 KDM4AO75164 1064 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CYP2B6P20813 491 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 MCCP23508 829 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 IRF5Q13568 498 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TMEM132BQ14DG7 1078 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 MTFR1Q15390 333 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 MB21D1Q8N884 522 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ESR2Q92731 530 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
HLA-DQB1-202ENST00000399079 LAMA4Q16363 1823 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PARP14Q460N5 1801 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CYP21A2P08686 494 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 BMP3P12645 472 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 RCSD1Q6JBY9 416 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SLAIN1Q8ND83 568 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 NUDT12Q9BQG2 462 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PPP4R2Q9NY27 417 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ISY1Q9ULR0 285 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TAF6LQ9Y6J9 622 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 A0A0G2JMZ2 1700 aa16.62■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ERCC3P19447 782 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SLC1A4P43007 532 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 MORN1Q5T089 497 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 KCTD1Q719H9 257 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PRPF38AQ8NAV1 312 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PXYLP1Q8TE99 480 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 USP6NLQ92738 828 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PLXNB2O15031 1838 aa16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 KIAA0100Q14667 2235 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 NCAPG2Q86XI2 1143 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 REPS2Q8NFH8 660 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SOCS4Q8WXH5 440 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 GMCL1Q96IK5 515 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 FEM1BQ9UK73 627 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ZNF214Q9UL59 606 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 INHAP05111 366 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 PTPREP23469 700 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 RGS19P49795 217 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TRIM32Q13049 653 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TRIB2Q92519 343 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TTC14Q96N46 770 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
HLA-DQB1-202ENST00000399079 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 STAT3P40763 770 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 STAT2P52630 851 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 IKQ13123 557 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CCL14Q16627 93 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 KIAA1211Q6ZU35 1233 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SHCBP1Q8NEM2 672 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 KRT23Q9C075 422 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
HLA-DQB1-202ENST00000399079 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 CCL5P13501 91 aa16.58■□□□□ 0.24
HLA-DQB1-202ENST00000399079 EN2P19622 333 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms