RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 P2RX7Q99572 595 aaKnown RBP12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 ADAMTS5Q9UNA0 930 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 WDR19Q8NEZ3 1342 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 PLA2G6O60733 806 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 BMP3P12645 472 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 SP3Q02447 781 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 COL9A3Q14050 684 aaPredicted RBP12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 FAM83BQ5T0W9 1011 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNF296Q8WUU4 475 aaPredicted RBP12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 DCAF4Q8WV16 495 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 TMEM87BQ96K49 555 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 TANGO6Q9C0B7 1094 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 HOXC10Q9NYD6 342 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 MORF4L1Q9UBU8 362 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 CPA4Q9UI42 421 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNF236Q9UL36 1845 aa12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNFX1Q9P2E3 1918 aaKnown RBP12.27□□□□□ -0.45
CYCSP55-201ENST00000399027 ERICH2A1L162 156 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 IFIT3O14879 490 aaKnown RBP12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 RAD21O60216 631 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 FKTNO75072 461 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 SEC24BO95487 1268 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 HMGB1P09429 215 aaKnown RBP12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 PDHBP11177 359 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 MCCP23508 829 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 DSG3P32926 999 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 EXOSC10Q01780 885 aaKnown RBP12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 IFIT1BQ5T764 474 aaKnown RBP12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 CHST3Q7LGC8 479 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 IL17RAQ96F46 866 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 NUP88Q99567 741 aaPredicted RBP12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 RBPJLQ9UBG7 517 aa12.26□□□□□ -0.45
CYCSP55-201ENST00000399027 RBBP6Q7Z6E9 1792 aaKnown RBP12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 SH2B2O14492 632 aaPredicted RBP12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 PRC1O43663 620 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 CNMDO75829 334 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 FLOT1O75955 427 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 LIFRP42702 1097 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 SLC1A4P43007 532 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 LACTBP83111 547 aaPredicted RBP12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 WTAPQ15007 396 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 RASGRP2Q7LDG7 609 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 ERO1AQ96HE7 468 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 SLF1Q9BQI6 1058 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 LY9Q9HBG7 655 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 FBXO28Q9NVF7 368 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 FEM1BQ9UK73 627 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 PPP1R9AQ9ULJ8 1098 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
CYCSP55-201ENST00000399027 PSMA5P28066 241 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 STAT2P52630 851 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 ANAPC15P60006 121 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 ERVK-9P63128 1117 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 ERVK-24P63145 666 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNF543Q08ER8 600 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 TMEM67Q5HYA8 995 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 BTNL9Q6UXG8 535 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 FAM160B2Q86V87 743 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 MB21D1Q8N884 522 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 PRPF38AQ8NAV1 312 aaKnown RBP12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 REPS2Q8NFH8 660 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 TM6SF1Q9BZW5 370 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 BTBD7Q9P203 1132 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 PLXNA1Q9UIW2 1896 aa12.24□□□□□ -0.45
CYCSP55-201ENST00000399027 TMEM232C9JQI7 657 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 VWA5AO00534 786 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 FDX1P10109 184 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 CTGFP29279 349 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 CAP1Q01518 475 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 TROAPQ12815 778 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 BLOC1S2Q6QNY1 142 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 KCTD1Q719H9 257 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 GPRC5AQ8NFJ5 357 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 CD99L2Q8TCZ2 262 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 MAP3K14Q99558 947 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms