RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 LDHDQ86WU2 507 aa19.33■□□□□ 0.68
CDH23-204ENST00000398792 TNPO1Q92973 898 aaKnown RBP19.33■□□□□ 0.68
CDH23-204ENST00000398792 C8orf76Q96K31 380 aa19.33■□□□□ 0.68
CDH23-204ENST00000398792 GOPCQ9HD26 462 aa19.33■□□□□ 0.68
CDH23-204ENST00000398792 PHIPQ8WWQ0 1821 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 H3BQV1 296 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 CYTH3O43739 400 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 PPP1R12BO60237 982 aaPredicted RBP19.32■□□□□ 0.68
CDH23-204ENST00000398792 SMARCA1P28370 1054 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 SLC1A4P43007 532 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 IFFO2Q5TF58 517 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
CDH23-204ENST00000398792 MAP1SQ66K74 1059 aaPredicted RBP19.32■□□□□ 0.68
CDH23-204ENST00000398792 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
CDH23-204ENST00000398792 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
CDH23-204ENST00000398792 VCPKMTQ9H867 229 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 PICK1Q9NRD5 415 aa19.32■□□□□ 0.68
CDH23-204ENST00000398792 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
CDH23-204ENST00000398792 F13A1P00488 732 aa19.31■□□□□ 0.68
CDH23-204ENST00000398792 PKN1Q16512 942 aa19.31■□□□□ 0.68
CDH23-204ENST00000398792 KCTD1Q719H9 257 aa19.31■□□□□ 0.68
CDH23-204ENST00000398792 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
CDH23-204ENST00000398792 CPVLQ9H3G5 476 aa19.31■□□□□ 0.68
CDH23-204ENST00000398792 GPCPD1Q9NPB8 672 aa19.31■□□□□ 0.68
CDH23-204ENST00000398792 V9GY48 417 aaPredicted RBP19.31■□□□□ 0.68
CDH23-204ENST00000398792 hCG_1642624A0A1W2PR95 340 aa19.3■□□□□ 0.68
CDH23-204ENST00000398792 PTPRAP18433 802 aa19.3■□□□□ 0.68
CDH23-204ENST00000398792 IREB2P48200 963 aaKnown RBP19.3■□□□□ 0.68
CDH23-204ENST00000398792 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.3■□□□□ 0.68
CDH23-204ENST00000398792 FBXO18Q8NFZ0 1043 aa19.3■□□□□ 0.68
CDH23-204ENST00000398792 FEZ1Q99689 392 aa19.3■□□□□ 0.68
CDH23-204ENST00000398792 SNCAIPQ9Y6H5 919 aa19.3■□□□□ 0.68
CDH23-204ENST00000398792 MAP3K9P80192 1104 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 VGLL4Q14135 290 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 NUP88Q99567 741 aaPredicted RBP19.29■□□□□ 0.68
CDH23-204ENST00000398792 WDR18Q9BV38 432 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 KIAA1683Q9H0B3 1180 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 RIOX1Q9H6W3 641 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 AS3MTQ9HBK9 375 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 GJB4Q9NTQ9 266 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 BMP3P12645 472 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 SCG2P13521 617 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 GUCY1B3Q02153 619 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
CDH23-204ENST00000398792 MAP3K11Q16584 847 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 PFKFB3Q16875 520 aaPredicted RBP19.29■□□□□ 0.68
CDH23-204ENST00000398792 OTUD7BQ6GQQ9 843 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 TTBK2Q6IQ55 1244 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 SPICE1Q8N0Z3 855 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 UBA5Q9GZZ9 404 aa19.29■□□□□ 0.68
CDH23-204ENST00000398792 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
CDH23-204ENST00000398792 TRAF5O00463 557 aa19.28■□□□□ 0.68
CDH23-204ENST00000398792 KRT40Q6A162 431 aa19.28■□□□□ 0.68
CDH23-204ENST00000398792 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
CDH23-204ENST00000398792 CSADQ9Y600 493 aa19.28■□□□□ 0.68
CDH23-204ENST00000398792 USP17L10C9JJH3 530 aa19.27■□□□□ 0.68
CDH23-204ENST00000398792 MTMR2Q13614 643 aa19.27■□□□□ 0.68
CDH23-204ENST00000398792 TRIM29Q14134 588 aa19.27■□□□□ 0.68
CDH23-204ENST00000398792 FERMT3Q86UX7 667 aa19.27■□□□□ 0.68
CDH23-204ENST00000398792 ZNF280CQ8ND82 737 aa19.27■□□□□ 0.68
CDH23-204ENST00000398792 RRP36Q96EU6 259 aaKnown RBP19.27■□□□□ 0.68
CDH23-204ENST00000398792 SLC16A2P36021 539 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 RESTQ13127 1097 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 TTLL12Q14166 644 aaPredicted RBP19.26■□□□□ 0.67
CDH23-204ENST00000398792 FAM83BQ5T0W9 1011 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 MOB2Q70IA6 237 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 ANKRD13AQ8IZ07 590 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 LPAR1Q92633 364 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 SHISA4Q96DD7 197 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 VPS54Q9P1Q0 977 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 ZHX2Q9Y6X8 837 aa19.26■□□□□ 0.67
CDH23-204ENST00000398792 XBP1P17861 261 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 USP14P54578 494 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 SPP2Q13103 211 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 CLEC17AQ6ZS10 378 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 ARMC9Q7Z3E5 817 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 HOMER1Q86YM7 354 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 ADGRF4Q8IZF3 695 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 PIGSQ96S52 555 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 JMJD4Q9H9V9 463 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
CDH23-204ENST00000398792 BAZ2BQ9UIF8 2168 aaKnown RBP19.25■□□□□ 0.67
CDH23-204ENST00000398792 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 WDR46O15213 610 aaKnown RBP19.25■□□□□ 0.67
CDH23-204ENST00000398792 MMP1P03956 469 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 BACE1P56817 501 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 FMR1Q06787 632 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDH23-204ENST00000398792 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 BTNL9Q6UXG8 535 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 VAT1LQ9HCJ6 419 aa19.25■□□□□ 0.67
CDH23-204ENST00000398792 MYH15Q9Y2K3 1946 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 TRIM75PA6NK02 468 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 STAT2P52630 851 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 DGKZQ13574 1117 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 SYDE2Q5VT97 1194 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 MCTP1Q6DN14 999 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 GPKOWQ92917 476 aaPredicted RBP eCLIP19.24■□□□□ 0.67
CDH23-204ENST00000398792 GBP4Q96PP9 640 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms