RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SPATA1Q5VX52 437 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 CCDC77Q9BR77 488 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 TBC1D7Q9P0N9 293 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 MYO3AQ8NEV4 1616 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 PPEF1O14829 653 aaPredicted RBP15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 RAD51AP2Q09MP3 1159 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 BIRC3Q13489 604 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 SYMPKQ92797 1274 aaKnown RBP15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 SLFN13Q68D06 897 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 MSANTD4Q8NCY6 345 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 OR8K1Q8NGG5 319 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 GSDMAQ96QA5 445 aa15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 CCDC94Q9BW85 323 aaPredicted RBP15.83■□□□□ 0.13
PCDHGA11-201ENST00000398587 WDR44Q5JSH3 913 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 RNF187Q5TA31 235 aaPredicted RBP15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 MMP1P03956 469 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 FBXO11Q86XK2 927 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 SECISBP2LQ93073 1101 aaKnown RBP15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 KIFC2Q96AC6 838 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 MRPL44Q9H9J2 332 aaKnown RBP15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 SWAP70Q9UH65 585 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 MTUS1Q9ULD2 1270 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 C1orf167Q5SNV9 1468 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
PCDHGA11-201ENST00000398587 KCNJ18B7U540 433 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 GAS7O60861 476 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 GCNT3O95395 438 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 GNA14O95837 355 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 MORC3Q14149 939 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 KCNJ12Q14500 433 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 FAM182BQ5T319 152 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 MYOCDQ8IZQ8 938 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 KIFAP3Q92845 792 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 NOX5Q96PH1 765 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 SLF1Q9BQI6 1058 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 SRP68Q9UHB9 627 aaKnown RBP15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 ADAMTS13Q76LX8 1427 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 LAD1O00515 517 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 EXOC3O60645 756 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 DNM2P50570 870 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 UIMC1Q96RL1 719 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 MAGEF1Q9HAY2 307 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 GRAPQ13588 217 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 GRAPLQ8TC17 118 aaPredicted RBP15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 CSRNP2Q9H175 543 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 IKBKGQ9Y6K9 419 aa15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 DDX39AO00148 427 aaKnown RBP15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 ADKP55263 362 aaKnown RBP15.82■□□□□ 0.12
PCDHGA11-201ENST00000398587 NBPF26B4DH59 902 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 LRMPQ12912 555 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 NBPF10Q6P3W6 841 aaKnown RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 HDXQ7Z353 690 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 SLFN12Q8IYM2 578 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 NBPF15Q8N660 670 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 TRIM37O94972 964 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 FOSP01100 380 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 GJC1P36383 396 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 TOB2Q14106 344 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 GPBP1Q86WP2 473 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 IFT81Q8WYA0 676 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 FTOQ9C0B1 505 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 SERPINB13Q9UIV8 391 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 PCDHA4Q9UN74 947 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 MRPL11Q9Y3B7 192 aaKnown RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 PCDHA1Q9Y5I3 950 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 CPS1P31327 1500 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 SOS2Q07890 1332 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 ATP2A1O14983 1001 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 RPN1P04843 607 aaKnown RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 RABL6Q3YEC7 729 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 NAP1L3Q99457 506 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 CUEDC2Q9H467 287 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 OGFRQ9NZT2 677 aa15.81■□□□□ 0.12
PCDHGA11-201ENST00000398587 PRPF3O43395 683 aaKnown RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 CYP2E1P05181 493 aaPredicted RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 PRR16Q569H4 304 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 FAM207AQ9NSI2 230 aaPredicted RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 PLCB3Q01970 1234 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 LRRC8AQ8IWT6 810 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 TPH2Q8IWU9 490 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 ARFGAP2Q8N6H7 521 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 BRIP1Q9BX63 1249 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 IKBKBO14920 756 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 MECOMQ03112 1051 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 ABCB5Q2M3G0 1257 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 HOMER2Q9NSB8 354 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 NARFQ9UHQ1 456 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 FLOT1O75955 427 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 STRN3Q13033 797 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 NR5A1Q13285 461 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms