RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 PKP1Q13835 747 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 FANCLQ9NW38 375 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 GNPATO15228 680 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 PHBP35232 272 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 GINS2Q9Y248 185 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 PRPF6O94906 941 aaKnown RBP12.98□□□□□ -0.33
TMF1-201ENST00000398559 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 PHLDB3Q6NSJ2 640 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 KSR1Q8IVT5 923 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 REXO1Q8N1G1 1221 aaKnown RBP12.98□□□□□ -0.33
TMF1-201ENST00000398559 A2MP01023 1474 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 CHL1O00533 1208 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 TNNI1P19237 187 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 SLC12A2P55011 1212 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 GPBP1Q86WP2 473 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 UHMK1Q8TAS1 419 aaKnown RBP12.98□□□□□ -0.33
TMF1-201ENST00000398559 GRK7Q8WTQ7 553 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 EDC3Q96F86 508 aaKnown RBP12.98□□□□□ -0.33
TMF1-201ENST00000398559 ZNF274Q96GC6 653 aaPredicted RBP12.98□□□□□ -0.33
TMF1-201ENST00000398559 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 TMOD4Q9NZQ9 345 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 TRPM2O94759 1503 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 TECP42680 631 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 NOSTRINQ8IVI9 506 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 PICK1Q9NRD5 415 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 PYCARDQ9ULZ3 195 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 VPS41P49754 854 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 DNM2P50570 870 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 ETF1P62495 437 aaKnown RBP12.98□□□□□ -0.33
TMF1-201ENST00000398559 TFAP4Q01664 338 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 MYOCDQ8IZQ8 938 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 RAB20Q9NX57 234 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 MTMR6Q9Y217 621 aa12.98□□□□□ -0.33
TMF1-201ENST00000398559 CFBP00751 764 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 IFNB1P01574 187 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 CLTAP09496 248 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 IRX4P78413 519 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 PPARAQ07869 468 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 NXNQ6DKJ4 435 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 MAPKAPK5Q8IW41 473 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 TGFBRAP1Q8WUH2 860 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 PPP1R13BQ96KQ4 1090 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 GGA1Q9UJY5 639 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 NDUFA8P51970 172 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 GCKRQ14397 625 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
TMF1-201ENST00000398559 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 HOXB7P09629 217 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 THAP12O43422 761 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 SNCBQ16143 134 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 RIC8AQ9NPQ8 531 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 ATP5JP18859 108 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 SLC8A1P32418 973 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
TMF1-201ENST00000398559 CCT5P48643 541 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 NSMCE1Q8WV22 266 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 SEC31AO94979 1220 aaKnown RBP12.96□□□□□ -0.33
TMF1-201ENST00000398559 KRT81Q14533 505 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 PALD1Q9ULE6 856 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 A0A0D9SFI3 127 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 POLR2FP61218 127 aaKnown RBP12.96□□□□□ -0.33
TMF1-201ENST00000398559 PANK4Q9NVE7 773 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 CLIC4Q9Y696 253 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 FRMD3A2A2Y4 597 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 A1BGP04217 495 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 CMA1P23946 247 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
TMF1-201ENST00000398559 TCP1P17987 556 aaKnown RBP12.96□□□□□ -0.34
TMF1-201ENST00000398559 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.34
TMF1-201ENST00000398559 CUL4BQ13620 913 aa12.96□□□□□ -0.34
TMF1-201ENST00000398559 RPS6KA2Q15349 733 aa12.96□□□□□ -0.34
TMF1-201ENST00000398559 CPXCR1Q8N123 301 aa12.96□□□□□ -0.34
TMF1-201ENST00000398559 PFKFB2O60825 505 aa12.96□□□□□ -0.34
TMF1-201ENST00000398559 WDR70Q9NW82 654 aa12.96□□□□□ -0.34
TMF1-201ENST00000398559 TPX2Q9ULW0 747 aaKnown RBP12.96□□□□□ -0.34
TMF1-201ENST00000398559 KCTD16Q68DU8 428 aa12.95□□□□□ -0.34
TMF1-201ENST00000398559 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
TMF1-201ENST00000398559 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms