RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GPR142Q7Z601 462 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 ATG4CQ96DT6 458 aa19.8■□□□□ 0.76
APTR-201ENST00000398043 MKI67P46013 3256 aaKnown RBP19.79■□□□□ 0.76
APTR-201ENST00000398043 TSPY2A6NKD2 308 aa19.79■□□□□ 0.76
APTR-201ENST00000398043 PCP11498 1178 aaKnown RBP19.79■□□□□ 0.76
APTR-201ENST00000398043 ELNP15502 786 aa19.79■□□□□ 0.76
APTR-201ENST00000398043 AKNAD1Q5T1N1 836 aa19.79■□□□□ 0.76
APTR-201ENST00000398043 MB21D1Q8N884 522 aa19.79■□□□□ 0.76
APTR-201ENST00000398043 NUP88Q99567 741 aaPredicted RBP19.79■□□□□ 0.76
APTR-201ENST00000398043 RANBP6O60518 1105 aaKnown RBP19.78■□□□□ 0.76
APTR-201ENST00000398043 CCNA1P78396 465 aa19.78■□□□□ 0.76
APTR-201ENST00000398043 MTFR1Q15390 333 aa19.78■□□□□ 0.76
APTR-201ENST00000398043 PLEKHH3Q7Z736 793 aa19.78■□□□□ 0.76
APTR-201ENST00000398043 LRRC47Q8N1G4 583 aaKnown RBP19.78■□□□□ 0.76
APTR-201ENST00000398043 REPS2Q8NFH8 660 aa19.78■□□□□ 0.76
APTR-201ENST00000398043 MOV10L1Q9BXT6 1211 aaKnown RBP19.78■□□□□ 0.76
APTR-201ENST00000398043 TCP11L1Q9NUJ3 509 aa19.78■□□□□ 0.76
APTR-201ENST00000398043 PPP1R9AQ9ULJ8 1098 aa19.78■□□□□ 0.76
APTR-201ENST00000398043 XRCC5P13010 732 aaKnown RBP19.77■□□□□ 0.76
APTR-201ENST00000398043 SHCBP1Q8NEM2 672 aa19.77■□□□□ 0.76
APTR-201ENST00000398043 SOCS4Q8WXH5 440 aa19.77■□□□□ 0.76
APTR-201ENST00000398043 NUDT12Q9BQG2 462 aa19.77■□□□□ 0.76
APTR-201ENST00000398043 SPATC1LQ9H0A9 340 aa19.77■□□□□ 0.76
APTR-201ENST00000398043 NEDD4P46934 1319 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 FRMPD3Q5JV73 1810 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 VWA5AO00534 786 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 ZNF213O14771 459 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 SGSM2O43147 1006 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 TMEM132BQ14DG7 1078 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 PPP4R3BQ5MIZ7 849 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 MFSD6Q6ZSS7 791 aa19.76■□□□□ 0.75
APTR-201ENST00000398043 ZNF214Q9UL59 606 aaPredicted RBP19.76■□□□□ 0.75
APTR-201ENST00000398043 INHAP05111 366 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 PTPREP23469 700 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 MLLT1Q03111 559 aaPredicted RBP19.75■□□□□ 0.75
APTR-201ENST00000398043 PTH1RQ03431 593 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 GRB14Q14449 540 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 RRP12Q5JTH9 1297 aaKnown RBP19.75■□□□□ 0.75
APTR-201ENST00000398043 SLFN13Q68D06 897 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 RCSD1Q6JBY9 416 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 RUFY2Q8WXA3 655 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 TRIB2Q92519 343 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 GMCL1Q96IK5 515 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 SLF1Q9BQI6 1058 aa19.75■□□□□ 0.75
APTR-201ENST00000398043 SLC15A5A6NIM6 579 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 RAD21O60216 631 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 MYCP01106 439 aaPredicted RBP19.74■□□□□ 0.75
APTR-201ENST00000398043 IGHA2P01877 340 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 CCL5P13501 91 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 EN2P19622 333 aaPredicted RBP19.74■□□□□ 0.75
APTR-201ENST00000398043 CYP2B6P20813 491 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 TMEM106CQ9BVX2 250 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 RNF41Q9H4P4 317 aaPredicted RBP19.74■□□□□ 0.75
APTR-201ENST00000398043 CTNNA3Q9UI47 895 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 STX8Q9UNK0 236 aa19.74■□□□□ 0.75
APTR-201ENST00000398043 HMGCRP04035 888 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 ERCC3P19447 782 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 NT5C2P49902 561 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 UBXN2AP68543 259 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 MAP2K5Q13163 448 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 BMP2KLQ5H9B9 411 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 RASGRP2Q7LDG7 609 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 CCAR1Q8IX12 1150 aaKnown RBP19.73■□□□□ 0.75
APTR-201ENST00000398043 PRPF38AQ8NAV1 312 aaKnown RBP19.73■□□□□ 0.75
APTR-201ENST00000398043 UNC93B1Q9H1C4 597 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 TOMM22Q9NS69 142 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 FEM1BQ9UK73 627 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 MCM3APO60318 1980 aa19.73■□□□□ 0.75
APTR-201ENST00000398043 MYH6P13533 1939 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 PLA2G6O60733 806 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 GJB1P08034 283 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 HOXC6P09630 235 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 BMP3P12645 472 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 RGS2P41220 211 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 TRIM32Q13049 653 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 CCL14Q16627 93 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 IMMTQ16891 758 aaKnown RBP19.72■□□□□ 0.75
APTR-201ENST00000398043 MAP3K21Q5TCX8 1036 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 RIOX2Q8IUF8 465 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 SHISA4Q96DD7 197 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 APBA2Q99767 749 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 TMEM47Q9BQJ4 181 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 MROH8Q9H579 483 aa19.72■□□□□ 0.75
APTR-201ENST00000398043 PAK6Q9NQU5 681 aaPredicted RBP19.72■□□□□ 0.75
APTR-201ENST00000398043 BIN2Q9UBW5 565 aaPredicted RBP19.72■□□□□ 0.75
APTR-201ENST00000398043 ATP2A1O14983 1001 aa19.71■□□□□ 0.75
APTR-201ENST00000398043 STRNO43815 780 aa19.71■□□□□ 0.75
APTR-201ENST00000398043 MCCP23508 829 aa19.71■□□□□ 0.75
APTR-201ENST00000398043 SAMD1Q6SPF0 538 aaPredicted RBP19.71■□□□□ 0.75
APTR-201ENST00000398043 NPLOC4Q8TAT6 608 aa19.71■□□□□ 0.75
APTR-201ENST00000398043 ESR2Q92731 530 aa19.71■□□□□ 0.75
APTR-201ENST00000398043 TTC14Q96N46 770 aa19.71■□□□□ 0.75
APTR-201ENST00000398043 SLC25A27O95847 323 aa19.7■□□□□ 0.74
APTR-201ENST00000398043 CYP21A2P08686 494 aa19.7■□□□□ 0.74
APTR-201ENST00000398043 TOP1P11387 765 aaKnown RBP19.7■□□□□ 0.74
APTR-201ENST00000398043 STAT3P40763 770 aa19.7■□□□□ 0.74
APTR-201ENST00000398043 GJA8P48165 433 aa19.7■□□□□ 0.74
APTR-201ENST00000398043 PLS1Q14651 629 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms