RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CASP2P42575 452 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 ADCY1Q08828 1119 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 TBC1D8BQ0IIM8 1120 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 MRPL28Q13084 256 aaKnown RBP7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 PPP4R4Q6NUP7 873 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 PDXDC2PQ6P474 469 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 GOLGA5Q8TBA6 731 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 SSH3Q8TE77 659 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 NEK1Q96PY6 1258 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 DNAI2Q9GZS0 605 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 SGSM2O43147 1006 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 SRGAP3O43295 1099 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 GYS1P13807 737 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 IDEP14735 1019 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 RCN1Q15293 331 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 C10orf76Q5T2E6 689 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 CCDC144CPQ8IYA2 1237 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 PIBF1Q8WXW3 757 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 HPS3Q969F9 1004 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 SH3KBP1Q96B97 665 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 GNEQ9Y223 722 aaKnown RBP7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 DLEC1Q9Y238 1755 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 A0A0B4J203 849 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 PSDA5PKW4 1024 aaPredicted RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 GOLGA6L4A6NEF3 574 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 TBKBP1A7MCY6 615 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 ADCY5O95622 1261 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 PAPOLAP51003 745 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 FIP1L1Q6UN15 594 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 PPP1R42Q7Z4L9 355 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 ERMNQ8TAM6 284 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 ANKRD24Q8TF21 1146 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 ZNF483Q8TF39 744 aaPredicted RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 TPCN1Q9ULQ1 816 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 CACNA1FO60840 1977 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 IGSF1Q8N6C5 1336 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 PXDNLA1KZ92 1463 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 KDRP35968 1356 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 MYO1CO00159 1063 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 FOXN3O00409 490 aaPredicted RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 GADD45BO75293 160 aaPredicted RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 TBCAO75347 108 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 F13A1P00488 732 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 HSPA1AP0DMV8 641 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 HSPA1BP0DMV9 641 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 TAGLNQ01995 201 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 RASA2Q15283 850 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 RAVER1Q8IY67 606 aaKnown RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 TEX11Q8IYF3 940 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 EYA1Q99502 592 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 AXIN2Q9Y2T1 843 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 PRKAB1Q9Y478 270 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 CYP46A1Q9Y6A2 500 aa7.4□□□□□ -1.22
TM9SF4-202ENST00000398022 GOLGA6L10A0A0M3HER8 536 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 STXBP3O00186 592 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 CCDC192P0DO97 292 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 GNAT2P19087 354 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 PDCP20941 246 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 HNRNPH2P55795 449 aaKnown RBP7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 FAM117BQ6P1L5 589 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 SPATA21Q7Z572 469 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 SDCCAG8Q86SQ7 713 aaPredicted RBP7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 ERC1Q8IUD2 1116 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 TBC1D5Q92609 795 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 ASIC4Q96FT7 647 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 APBA2Q99767 749 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 USP44Q9H0E7 712 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 INCENPQ9NQS7 918 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 CNPY2Q9Y2B0 182 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 SQORQ9Y6N5 450 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 TTC41PQ6P2S7 1318 aa7.4□□□□□ -1.23
TM9SF4-202ENST00000398022 GOLGA6L19H0YKK7 550 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 HIP1O00291 1037 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 CPLX1O14810 134 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 BPNT1O95861 308 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 CASTP20810 708 aaKnown RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 SYT1P21579 422 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 HSD3B2P26439 372 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 ADD2P35612 726 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 GEMIN4P57678 1058 aaKnown RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 SPDYCQ5MJ68 293 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 CCDC122Q5T0U0 273 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 ZNF713Q8N859 430 aaPredicted RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.39□□□□□ -1.237e-9■■■■■ 72.6
TM9SF4-202ENST00000398022 KCTD5Q9NXV2 234 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 SNX14Q9Y5W7 946 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 OVOS2A0A0G2JMS6 1433 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 SRGNP10124 158 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 PYGBP11216 843 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 PECAM1P16284 738 aaPredicted RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 AK2P54819 239 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms