RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 V9GY48 417 aaPredicted RBP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 FAM221BA6H8Z2 402 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 A6NHS1 94 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 PCP11498 1178 aaKnown RBP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 GMPSP49915 693 aaPredicted RBP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 PPP4CP60510 307 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 HNRNPUQ00839 825 aaKnown RBP eCLIP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 CWF19L2Q2TBE0 894 aaKnown RBP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 METTL24Q5JXM2 366 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 OTUD7BQ6GQQ9 843 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 TEKT1Q969V4 418 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 SRPK1Q96SB4 655 aaKnown RBP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 RRAGCQ9HB90 399 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 CNOT7Q9UIV1 285 aaKnown RBP4.56□□□□□ -1.68
UBE3A-202ENST00000397954 RCAN3Q9UKA8 241 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 AK5Q9Y6K8 562 aa4.56□□□□□ -1.68
UBE3A-202ENST00000397954 MANSC4A6NHS7 340 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 PSMD14O00487 310 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ZFYP08048 801 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 SLC4A3P48751 1232 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 PRELPP51888 382 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 MCCD1P59942 119 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 DNM1Q05193 864 aaKnown RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 HDAC1Q13547 482 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ATP2B3Q16720 1220 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 CCDC158Q5M9N0 1113 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 CCDC181Q5TID7 509 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 FAM43BQ6ZT52 329 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 SH3RF1Q7Z6J0 888 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 KAZALD1Q96I82 304 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 OSBPL5Q9H0X9 879 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 EHD4Q9H223 541 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 YDJCA8MPS7 323 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 HAX1O00165 279 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 EPB41L2O43491 1005 aaKnown RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 IREB2P48200 963 aaKnown RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 DOK7Q18PE1 504 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ANKRD23Q86SG2 305 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 FMNL3Q8IVF7 1028 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 CNTROBQ8N137 903 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 SLC39A7Q92504 469 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 NOL10Q9BSC4 688 aaKnown RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 HERC5Q9UII4 1024 aaKnown RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 SIPA1L1O43166 1804 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ENPP3O14638 875 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 DNAJC6O75061 913 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 BAG3O95817 575 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 S100BP04271 92 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 IRS1P35568 1242 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 COPB2P35606 906 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ETFBP38117 255 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 CTCFP49711 727 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 EPHA4P54764 986 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 DLGAP5Q15398 846 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 NBPF20Q3BBV1 942 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 TTLL5Q6EMB2 1281 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ALG1LQ6GMV1 187 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ATG9AQ7Z3C6 839 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 VPS37DQ86XT2 251 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 GJD3Q8N144 294 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 GPKOWQ92917 476 aaPredicted RBP eCLIP4.55□□□□□ -1.68
UBE3A-202ENST00000397954 AIDAQ96BJ3 306 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 GPRASP2Q96D09 838 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 OSBPL7Q9BZF2 842 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 UNC93B1Q9H1C4 597 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 SPC25Q9HBM1 224 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 ZBTB40Q9NUA8 1239 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 SERTAD1Q9UHV2 236 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 PARP14Q460N5 1801 aa4.55□□□□□ -1.68
UBE3A-202ENST00000397954 POLR2AP24928 1970 aaKnown RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 SSC5DA1L4H1 1573 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 M0R2N6 131 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 HIP1O00291 1037 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 PPP1R12BO60237 982 aaPredicted RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 CLSTN1O94985 981 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 ANXA1P04083 346 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 GNAT2P19087 354 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 RNF20Q5VTR2 975 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 RAVER1Q8IY67 606 aaKnown RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 CKAP2LQ8IYA6 745 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 TRMT44Q8IYL2 757 aaKnown RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 FAM160A2Q8N612 972 aaPredicted RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 FAM151AQ8WW52 585 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 FAM84BQ96KN1 310 aaPredicted RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 ZNF112Q9UJU3 913 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 ERC2O15083 957 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 TM4SF4P48230 202 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 PABPC4Q13310 644 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 RCSD1Q6JBY9 416 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 POTEEQ6S8J3 1075 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 ETFBKMTQ8IXQ9 262 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 ARMC2Q8NEN0 867 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 FOXJ1Q92949 421 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 ZNF341Q9BYN7 854 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 GBA2Q9HCG7 927 aaPredicted RBP4.54□□□□□ -1.68
UBE3A-202ENST00000397954 FANCLQ9NW38 375 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 SNTG2Q9NY99 539 aa4.54□□□□□ -1.68
UBE3A-202ENST00000397954 MROH7-TTC4A0A0A0MT08 1334 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms