RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 RTN1Q16799 776 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 PRRT2Q7Z6L0 340 aaPredicted RBP17.71■□□□□ 0.43
SUMO3-203ENST00000397898 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
SUMO3-203ENST00000397898 NCOA5Q9HCD5 579 aaKnown RBP17.71■□□□□ 0.43
SUMO3-203ENST00000397898 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 NID2Q14112 1375 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.43
SUMO3-203ENST00000397898 GOLGA8HP0CJ92 632 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 VCAM1P19320 739 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 CDC27P30260 824 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 SNAPC2Q13487 334 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 CCDC96Q2M329 555 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 KCTD1Q719H9 257 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 GTF3C6Q969F1 213 aa17.71■□□□□ 0.43
SUMO3-203ENST00000397898 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
SUMO3-203ENST00000397898 PALM3A6NDB9 673 aaPredicted RBP17.7■□□□□ 0.42
SUMO3-203ENST00000397898 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
SUMO3-203ENST00000397898 BMP3P12645 472 aa17.7■□□□□ 0.42
SUMO3-203ENST00000397898 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
SUMO3-203ENST00000397898 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
SUMO3-203ENST00000397898 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
SUMO3-203ENST00000397898 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
SUMO3-203ENST00000397898 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
SUMO3-203ENST00000397898 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
SUMO3-203ENST00000397898 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
SUMO3-203ENST00000397898 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 SLC10A3P09131 477 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 SLC4A3P48751 1232 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 GTF2A2P52657 109 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 CCDC102AQ96A19 550 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 MS4A4AQ96JQ5 239 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
SUMO3-203ENST00000397898 FAM155AB1AL88 458 aaPredicted RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 GADL1Q6ZQY3 521 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 CCDC83Q8IWF9 413 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 PROCA1Q8NCQ7 364 aaPredicted RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 PTPRFP10586 1907 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 TMEM232C9JQI7 657 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 KLRF2D3W0D1 207 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 MOGSQ13724 837 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
SUMO3-203ENST00000397898 PAXIP1Q6ZW49 1069 aaPredicted RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 FASTKD5Q7L8L6 764 aaKnown RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
SUMO3-203ENST00000397898 CPLX1O14810 134 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 CETPP11597 493 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 GNAQP50148 359 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 DEFB115Q30KQ5 88 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 TREML2Q5T2D2 321 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 CYP4F22Q6NT55 531 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
SUMO3-203ENST00000397898 CCL15-CCL14A0A0B4J2E2 113 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 STAT2P52630 851 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 NTRK3Q16288 839 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 CCL15Q16663 113 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
SUMO3-203ENST00000397898 LZTS2Q9BRK4 669 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 UBA5Q9GZZ9 404 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 CPVLQ9H3G5 476 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 LOC285556D6RIA3 1793 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 SLC16A2P36021 539 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 IKQ13123 557 aaPredicted RBP17.66■□□□□ 0.42
SUMO3-203ENST00000397898 GRM1Q13255 1194 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 CUL4AQ13619 759 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 AGTPBP1Q9UPW5 1226 aa17.66■□□□□ 0.42
SUMO3-203ENST00000397898 PLA2G6O60733 806 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 CTDNEP1O95476 244 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 FUT2Q10981 343 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 CPLX2Q6PUV4 134 aaKnown RBP17.65■□□□□ 0.42
SUMO3-203ENST00000397898 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 FEM1BQ9UK73 627 aa17.65■□□□□ 0.42
SUMO3-203ENST00000397898 MANSC4A6NHS7 340 aaPredicted RBP17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L15C9J2P7 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L13C9JLJ4 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L11C9JVI0 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L18D6R9N7 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L22D6RA61 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L17D6RBQ6 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L19D6RCP7 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 USP17L20D6RJB6 530 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 CYTH3O43739 400 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 DTNBO60941 627 aa17.64■□□□□ 0.41
SUMO3-203ENST00000397898 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms