RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CCDC102BQ68D86 513 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 CRELD2Q6UXH1 353 aaPredicted RBP12.89□□□□□ -0.35
PUM3-202ENST00000397885 FBXL16Q8N461 479 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 PSMD1Q99460 953 aa12.89□□□□□ -0.35
PUM3-202ENST00000397885 LIN7AO14910 233 aaPredicted RBP12.88□□□□□ -0.35
PUM3-202ENST00000397885 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
PUM3-202ENST00000397885 RPS6KA3P51812 740 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 ITIH3Q06033 890 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 RBL2Q08999 1139 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 XRCC4Q13426 336 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 EMBQ6PCB8 327 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 ZNF662Q6ZS27 426 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 TPX2Q9ULW0 747 aaKnown RBP12.88□□□□□ -0.35
PUM3-202ENST00000397885 SEMA3EO15041 775 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 MGRN1O60291 552 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 PPP1R37O75864 691 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 ANXA1P04083 346 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 PDCLQ13371 301 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 NNTQ13423 1086 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 PNOCQ13519 176 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
PUM3-202ENST00000397885 EHBP1Q8NDI1 1231 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 LINS1Q8NG48 757 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 CCDC47Q96A33 483 aaKnown RBP12.88□□□□□ -0.35
PUM3-202ENST00000397885 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 EBF2Q9HAK2 575 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 KIF9Q9HAQ2 790 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
PUM3-202ENST00000397885 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 GRM8O00222 908 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 HSF2BPO75031 334 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
PUM3-202ENST00000397885 POLD1P28340 1107 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
PUM3-202ENST00000397885 PDE4BQ07343 736 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 PTGISQ16647 500 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 LACTB2Q53H82 288 aaPredicted RBP12.87□□□□□ -0.35
PUM3-202ENST00000397885 RESP18Q5W5W9 173 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 METTL16Q86W50 562 aaKnown RBP12.87□□□□□ -0.35
PUM3-202ENST00000397885 CCHCR1Q8TD31 782 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 ATRIPQ8WXE1 791 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 MMS19Q96T76 1030 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
PUM3-202ENST00000397885 MROH7-TTC4A0A0A0MT08 1334 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 KCNQ3O43525 872 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 CYP21A2P08686 494 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 PDHBP11177 359 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 TNFRSF8P28908 595 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 NLRP14Q86W24 1093 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 CAVIN3Q969G5 261 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 C8orf76Q96K31 380 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 CCT8L2Q96SF2 557 aa12.87□□□□□ -0.35
PUM3-202ENST00000397885 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
PUM3-202ENST00000397885 UTYO14607 1347 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 ZMYM6O95789 1325 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 EME2A4GXA9 379 aaPredicted RBP12.86□□□□□ -0.35
PUM3-202ENST00000397885 FDPSP14324 419 aaKnown RBP12.86□□□□□ -0.35
PUM3-202ENST00000397885 BMP6P22004 513 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 FOSBP53539 338 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 EPHB4P54760 987 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 TRIM14Q14142 442 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 TTMPQ5BVD1 217 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 MMGT1Q8N4V1 131 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 RABEP2Q9H5N1 569 aa12.86□□□□□ -0.35
PUM3-202ENST00000397885 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 SIK1P57059 783 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 CABP4P57796 275 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 IFT88Q13099 833 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 CORO1CQ9ULV4 474 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 ERICH2A1L162 156 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 AHCYL1O43865 530 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 DNAJC8O75937 253 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 FESP07332 822 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 SARSP49591 514 aaKnown RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 CWF19L2Q2TBE0 894 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms