RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 SEPT2Q15019 361 aa17.71■□□□□ 0.43
PPM1F-202ENST00000397495 NBPF12Q5TAG4 269 aaPredicted RBP17.71■□□□□ 0.43
PPM1F-202ENST00000397495 TMEM179Q6ZVK1 233 aa17.71■□□□□ 0.43
PPM1F-202ENST00000397495 ZSCAN30Q86W11 494 aa17.71■□□□□ 0.43
PPM1F-202ENST00000397495 CTCFLQ8NI51 663 aaPredicted RBP17.71■□□□□ 0.43
PPM1F-202ENST00000397495 BICD2Q8TD16 824 aa17.71■□□□□ 0.43
PPM1F-202ENST00000397495 KCNG4Q8TDN1 519 aa17.71■□□□□ 0.43
PPM1F-202ENST00000397495 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
PPM1F-202ENST00000397495 SNW1Q13573 536 aaKnown RBP17.7■□□□□ 0.42
PPM1F-202ENST00000397495 KRT40Q6A162 431 aa17.7■□□□□ 0.42
PPM1F-202ENST00000397495 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
PPM1F-202ENST00000397495 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
PPM1F-202ENST00000397495 MYH6P13533 1939 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 PLEKHA8P1O95397 391 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 GUCY1A2P33402 732 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 EPHX2P34913 555 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 CCAR1Q8IX12 1150 aaKnown RBP17.69■□□□□ 0.42
PPM1F-202ENST00000397495 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
PPM1F-202ENST00000397495 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
PPM1F-202ENST00000397495 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
PPM1F-202ENST00000397495 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 SCN4AP35499 1836 aa17.69■□□□□ 0.42
PPM1F-202ENST00000397495 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 EEF2P13639 858 aaKnown RBP17.68■□□□□ 0.42
PPM1F-202ENST00000397495 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 ICA1Q05084 483 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 FAM160A1Q05DH4 1040 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 TYRO3Q06418 890 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
PPM1F-202ENST00000397495 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
PPM1F-202ENST00000397495 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
PPM1F-202ENST00000397495 PCDHA7Q9UN72 937 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 KIF5BP33176 963 aa17.68■□□□□ 0.42
PPM1F-202ENST00000397495 USP50Q70EL3 339 aaPredicted RBP17.68■□□□□ 0.42
PPM1F-202ENST00000397495 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
PPM1F-202ENST00000397495 UBE2Q2LH0YL09 131 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 CAP2P40123 477 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 GRM4Q14833 912 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 SLC39A14Q15043 492 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 PPP4R3BQ5MIZ7 849 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 STAG2Q8N3U4 1231 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 MAP3K14Q99558 947 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 GOLPH3LQ9H4A5 285 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.67■□□□□ 0.42
PPM1F-202ENST00000397495 CCDC39Q9UFE4 941 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 ZBTB21Q9ULJ3 1066 aa17.67■□□□□ 0.42
PPM1F-202ENST00000397495 IQCA1LA6NCM1 817 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 PHF20L1A8MW92 1017 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 RAD21O60216 631 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 GOLGA8HP0CJ92 632 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 USP17L2Q6R6M4 530 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 DLK2Q6UY11 383 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 CCDC73Q6ZRK6 1079 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 SIAH1Q8IUQ4 282 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 TRIM22Q8IYM9 498 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 FMR1NBQ8N0W7 255 aaPredicted RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 GJB4Q9NTQ9 266 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 NYAP2Q9P242 653 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 PPP2R3BQ9Y5P8 575 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 CLIC4Q9Y696 253 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 POTECB2RU33 542 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 SPTLC2O15270 562 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 PPP6R2O75170 966 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 DEXIO95424 95 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 STK38Q15208 465 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 CAMK4Q16566 473 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 TPRNQ4KMQ1 711 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 SULF1Q8IWU6 871 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 TAF1DQ9H5J8 278 aaPredicted RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.66■□□□□ 0.42
PPM1F-202ENST00000397495 FZD1Q9UP38 647 aa17.66■□□□□ 0.42
PPM1F-202ENST00000397495 WDR90Q96KV7 1748 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 FAM237AA0A1B0GTK4 181 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 PARP1P09874 1014 aaKnown RBP17.65■□□□□ 0.42
PPM1F-202ENST00000397495 PDHBP11177 359 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 ME1P48163 572 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 FUT2Q10981 343 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 TRIM29Q14134 588 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 AXDND1Q5T1B0 1012 aaPredicted RBP17.65■□□□□ 0.42
PPM1F-202ENST00000397495 DCAF15Q66K64 600 aa17.65■□□□□ 0.42
PPM1F-202ENST00000397495 HOOK2Q96ED9 719 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms