RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 PRDM1O75626 825 aa22.52■■□□□ 1.2
MCF2L-207ENST00000397024 HDAC1Q13547 482 aaPredicted RBP22.52■■□□□ 1.2
MCF2L-207ENST00000397024 FAM83BQ5T0W9 1011 aa22.52■■□□□ 1.2
MCF2L-207ENST00000397024 MFSD14CQ5VZR4 134 aa22.52■■□□□ 1.2
MCF2L-207ENST00000397024 TRPV1Q8NER1 839 aa22.52■■□□□ 1.2
MCF2L-207ENST00000397024 NUP88Q99567 741 aaPredicted RBP22.52■■□□□ 1.2
MCF2L-207ENST00000397024 PRO3102Q9H379 93 aa22.52■■□□□ 1.2
MCF2L-207ENST00000397024 RBM27Q9P2N5 1060 aaKnown RBP22.52■■□□□ 1.2
MCF2L-207ENST00000397024 IGKV6D-41A0A0C4DH26 115 aa22.51■■□□□ 1.19
MCF2L-207ENST00000397024 LRRFIP1Q32MZ4 808 aaKnown RBP22.51■■□□□ 1.19
MCF2L-207ENST00000397024 DPP9Q86TI2 863 aa22.51■■□□□ 1.19
MCF2L-207ENST00000397024 NCAPG2Q86XI2 1143 aa22.51■■□□□ 1.19
MCF2L-207ENST00000397024 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
MCF2L-207ENST00000397024 NYAP2Q9P242 653 aa22.51■■□□□ 1.19
MCF2L-207ENST00000397024 STAP2Q9UGK3 403 aa22.51■■□□□ 1.19
MCF2L-207ENST00000397024 FOXP2O15409 715 aa22.5■■□□□ 1.19
MCF2L-207ENST00000397024 CCDC129Q6ZRS4 1044 aa22.5■■□□□ 1.19
MCF2L-207ENST00000397024 MROH8Q9H579 483 aa22.5■■□□□ 1.19
MCF2L-207ENST00000397024 C11orf49Q9H6J7 331 aa22.5■■□□□ 1.19
MCF2L-207ENST00000397024 CLIP2Q9UDT6 1046 aa22.5■■□□□ 1.19
MCF2L-207ENST00000397024 PFASO15067 1338 aa22.5■■□□□ 1.19
MCF2L-207ENST00000397024 COL11A1P12107 1806 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-207ENST00000397024 F5H6K3 240 aa22.49■■□□□ 1.19
MCF2L-207ENST00000397024 VWA5AO00534 786 aa22.49■■□□□ 1.19
MCF2L-207ENST00000397024 KLRC3Q07444 240 aa22.49■■□□□ 1.19
MCF2L-207ENST00000397024 ZNF444Q8N0Y2 327 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-207ENST00000397024 REPS2Q8NFH8 660 aa22.49■■□□□ 1.19
MCF2L-207ENST00000397024 PPP1R9AQ9ULJ8 1098 aa22.49■■□□□ 1.19
MCF2L-207ENST00000397024 ZNFX1Q9P2E3 1918 aaKnown RBP22.49■■□□□ 1.19
MCF2L-207ENST00000397024 COL6A1P12109 1028 aa22.48■■□□□ 1.19
MCF2L-207ENST00000397024 PDE1AP54750 535 aa22.48■■□□□ 1.19
MCF2L-207ENST00000397024 NDUFB10O96000 172 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 CNGA1P29973 690 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 OLFML2BQ68BL8 750 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 C7orf61Q8IZ16 206 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 ABRAQ8N0Z2 381 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 MKL1Q969V6 931 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 CEP95Q96GE4 821 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 NACAP1Q9BZK3 213 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 INCENPQ9NQS7 918 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 MTMR4Q9NYA4 1195 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 ZBTB47Q9UFB7 747 aaPredicted RBP22.47■■□□□ 1.19
MCF2L-207ENST00000397024 ZNF214Q9UL59 606 aaPredicted RBP22.47■■□□□ 1.19
MCF2L-207ENST00000397024 ZNF236Q9UL36 1845 aa22.47■■□□□ 1.19
MCF2L-207ENST00000397024 CYBAP13498 195 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 STAT3P40763 770 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 PPARAQ07869 468 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 FAM47AQ5JRC9 791 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 PRAMEF19Q5SWL8 479 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 RIOX2Q8IUF8 465 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 NAPBQ9H115 298 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 DDX20Q9UHI6 824 aaKnown RBP22.46■■□□□ 1.19
MCF2L-207ENST00000397024 ZMYND8Q9ULU4 1186 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-207ENST00000397024 TACC3Q9Y6A5 838 aa22.46■■□□□ 1.19
MCF2L-207ENST00000397024 SLC25A27O95847 323 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 FCER1AP12319 257 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 NEDD1Q8NHV4 660 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 EVI5LQ96CN4 794 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 ZNF287Q9HBT7 754 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 PCDH10Q9P2E7 1040 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 LAMA3Q16787 3333 aa22.45■■□□□ 1.18
MCF2L-207ENST00000397024 TFAP4Q01664 338 aa22.44■■□□□ 1.18
MCF2L-207ENST00000397024 FRMPD3Q5JV73 1810 aa22.44■■□□□ 1.18
MCF2L-207ENST00000397024 MAML3Q96JK9 1138 aa22.44■■□□□ 1.18
MCF2L-207ENST00000397024 SLF1Q9BQI6 1058 aa22.44■■□□□ 1.18
MCF2L-207ENST00000397024 LNPKQ9C0E8 428 aa22.44■■□□□ 1.18
MCF2L-207ENST00000397024 MYH4Q9Y623 1939 aa22.44■■□□□ 1.18
MCF2L-207ENST00000397024 IGHDP01880 384 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 PGK2P07205 417 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 CTDSPL2Q05D32 466 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 PDE4BQ07343 736 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 LRRC26Q2I0M4 334 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 ANO1Q5XXA6 986 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 LRRC47Q8N1G4 583 aaKnown RBP22.43■■□□□ 1.18
MCF2L-207ENST00000397024 RIPK3Q9Y572 518 aa22.43■■□□□ 1.18
MCF2L-207ENST00000397024 TTLL1O95922 423 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 TSPY3P0CV98 308 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 TSPY8P0CW00 308 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 SYN1P17600 705 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 SMC5Q8IY18 1101 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 PRPF38AQ8NAV1 312 aaKnown RBP22.42■■□□□ 1.18
MCF2L-207ENST00000397024 EXOC6Q8TAG9 804 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 FAM227BQ96M60 508 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 MMP19Q99542 508 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 SLC5A4Q9NY91 659 aa22.42■■□□□ 1.18
MCF2L-207ENST00000397024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.42■■□□□ 1.18
MCF2L-207ENST00000397024 MSCO60682 206 aa22.41■■□□□ 1.18
MCF2L-207ENST00000397024 ZNF792Q3KQV3 632 aa22.41■■□□□ 1.18
MCF2L-207ENST00000397024 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
MCF2L-207ENST00000397024 GDF15Q99988 308 aa22.41■■□□□ 1.18
MCF2L-207ENST00000397024 SMCHD1A6NHR9 2005 aa22.41■■□□□ 1.18
MCF2L-207ENST00000397024 PLIN4Q96Q06 1357 aa22.4■■□□□ 1.18
MCF2L-207ENST00000397024 A0A0D9SFI3 127 aa22.4■■□□□ 1.18
MCF2L-207ENST00000397024 SLC3A2P08195 630 aaKnown RBP22.4■■□□□ 1.18
MCF2L-207ENST00000397024 GMCL1P1Q8NEA9 526 aa22.4■■□□□ 1.18
MCF2L-207ENST00000397024 SENP6Q9GZR1 1112 aaPredicted RBP22.4■■□□□ 1.18
MCF2L-207ENST00000397024 HELLSQ9NRZ9 838 aa22.4■■□□□ 1.18
MCF2L-207ENST00000397024 SEPT4O43236 478 aa22.39■■□□□ 1.17
MCF2L-207ENST00000397024 AAMPQ13685 434 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms