RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 SOCS4Q8WXH5 440 aa9.83□□□□□ -0.84
NUP98-206ENST00000397013 TBC1D2Q9BYX2 928 aa9.83□□□□□ -0.84
NUP98-206ENST00000397013 CCDC8Q9H0W5 538 aaPredicted RBP9.83□□□□□ -0.84
NUP98-206ENST00000397013 DHX36Q9H2U1 1008 aaKnown RBP9.83□□□□□ -0.84
NUP98-206ENST00000397013 C1orf115Q9H7X2 142 aa9.83□□□□□ -0.84
NUP98-206ENST00000397013 PTPRFP10586 1907 aa9.83□□□□□ -0.84
NUP98-206ENST00000397013 PRUNE2Q8WUY3 3088 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 BAG3O95817 575 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 GNAI2P04899 355 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 UQCRFS1P1P0C7P4 283 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 TRIM27P14373 513 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 CD46P15529 392 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 CYP7A1P22680 504 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 GUCY1A2P33402 732 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 PLCD1P51178 756 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 RAB3GAP1Q15042 981 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 SHHQ15465 462 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 TNNI3KQ59H18 835 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 PRAMEF19Q5SWL8 479 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 CATSPERGQ6ZRH7 1159 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 SH3RF1Q7Z6J0 888 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.82□□□□□ -0.84
NUP98-206ENST00000397013 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 FRAT1Q92837 279 aaPredicted RBP9.82□□□□□ -0.84
NUP98-206ENST00000397013 APBA2Q99767 749 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 NOL10Q9BSC4 688 aaKnown RBP9.82□□□□□ -0.84
NUP98-206ENST00000397013 ANTXR1Q9H6X2 564 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 FPGT-TNNI3KV9GXZ4 949 aa9.82□□□□□ -0.84
NUP98-206ENST00000397013 COL2A1P02458 1487 aaPredicted RBP9.82□□□□□ -0.84
NUP98-206ENST00000397013 DDX60LQ5H9U9 1706 aaKnown RBP9.82□□□□□ -0.84
NUP98-206ENST00000397013 CDH23Q9H251 3354 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 A0A1W2PRG0 241 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L15C9J2P7 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L13C9JLJ4 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L11C9JVI0 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L18D6R9N7 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L22D6RA61 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L17D6RBQ6 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L19D6RCP7 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L20D6RJB6 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 IGHA2P01877 340 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 RTP1P59025 263 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 ATP2B2Q01814 1243 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 USP17L24Q0WX57 530 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 KIAA1755Q5JYT7 1200 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 TATDN1Q6P1N9 297 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 TMEM57Q8N5G2 664 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 PCMTD1Q96MG8 357 aaPredicted RBP9.81□□□□□ -0.84
NUP98-206ENST00000397013 CDX2Q99626 313 aaPredicted RBP9.81□□□□□ -0.84
NUP98-206ENST00000397013 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 CWC22Q9HCG8 908 aaKnown RBP9.81□□□□□ -0.84
NUP98-206ENST00000397013 DDX20Q9UHI6 824 aaKnown RBP9.81□□□□□ -0.84
NUP98-206ENST00000397013 DBNLQ9UJU6 430 aaKnown RBP9.81□□□□□ -0.84
NUP98-206ENST00000397013 HDAC5Q9UQL6 1122 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 RABGAP1Q9Y3P9 1069 aa9.81□□□□□ -0.84
NUP98-206ENST00000397013 SLC15A5A6NIM6 579 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 SMIM22K7EJ46 135 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 SMAPO00193 183 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 COBLO75128 1261 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 SURF6O75683 361 aaKnown RBP9.8□□□□□ -0.84
NUP98-206ENST00000397013 VCAM1P19320 739 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 SHMT1P34896 483 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
NUP98-206ENST00000397013 MFSD14CQ5VZR4 134 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 TRMT44Q8IYL2 757 aaKnown RBP9.8□□□□□ -0.84
NUP98-206ENST00000397013 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 FERMT2Q96AC1 680 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 EAF2Q96CJ1 260 aaPredicted RBP9.8□□□□□ -0.84
NUP98-206ENST00000397013 SEMA6BQ9H3T3 888 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 RPAP3Q9H6T3 665 aaPredicted RBP9.8□□□□□ -0.84
NUP98-206ENST00000397013 ATP11BQ9Y2G3 1177 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 LOC285556D6RIA3 1793 aa9.8□□□□□ -0.84
NUP98-206ENST00000397013 SIPA1L1O43166 1804 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 TRIM43BA6NCK2 446 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 POTEMA6NI47 508 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 IDH1O75874 414 aaKnown RBP9.79□□□□□ -0.84
NUP98-206ENST00000397013 CYP2D6P10635 497 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 ITGB8P26012 769 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 USP5P45974 858 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 EPHB4P54760 987 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 ATP8B2P98198 1209 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 GRB14Q14449 540 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 SEPT2Q15019 361 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 ABCB5Q2M3G0 1257 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 SLFNL1Q499Z3 407 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 CERKLQ49MI3 558 aaPredicted RBP9.79□□□□□ -0.84
NUP98-206ENST00000397013 CCDC158Q5M9N0 1113 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 SLC39A5Q6ZMH5 540 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 MAGEB6Q8N7X4 407 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 LPAR1Q92633 364 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 BADQ92934 168 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 TRIM43Q96BQ3 446 aaPredicted RBP9.79□□□□□ -0.84
NUP98-206ENST00000397013 C12orf42Q96LP6 360 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 FEZ1Q99689 392 aa9.79□□□□□ -0.84
NUP98-206ENST00000397013 LBHD1Q9BQE6 289 aaPredicted RBP9.79□□□□□ -0.84
NUP98-206ENST00000397013 MOV10L1Q9BXT6 1211 aaKnown RBP9.79□□□□□ -0.84
NUP98-206ENST00000397013 TTYH1Q9H313 450 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms