RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MBIPQ9NS73 344 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 CHPF2Q9P2E5 772 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 TMEM259Q4ZIN3 620 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 ANO1Q5XXA6 986 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 RINT1Q6NUQ1 792 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 LSM14BQ9BX40 385 aaKnown RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 ZNF202O95125 648 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 CALCRLQ16602 461 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 BCL2L12Q9HB09 334 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 TAB2Q9NYJ8 693 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 PACSIN2Q9UNF0 486 aaPredicted RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 NLRP12P59046 1061 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 JARID2Q92833 1246 aaPredicted RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 CBX8Q9HC52 389 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 RAPH1Q70E73 1250 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 MYCT1Q8N699 235 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 FAM207AQ9NSI2 230 aaPredicted RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 WBP4O75554 376 aaKnown RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 STX1BP61266 288 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 CD19P15391 556 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 DMTNQ08495 405 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 GJC2Q5T442 439 aaPredicted RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 TRIM15Q9C019 465 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 RNF113AO15541 343 aaKnown RBP11.3□□□□□ -0.6
COL4A4-201ENST00000396625 TSC1Q92574 1164 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 GINS2Q9Y248 185 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 PTPN22Q9Y2R2 807 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 IQGAP2Q13576 1575 aa11.3□□□□□ -0.6
COL4A4-201ENST00000396625 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
COL4A4-201ENST00000396625 MIGA1Q8NAN2 632 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 ANAPC5Q9UJX4 755 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 INHBAP08476 426 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 NOP14P78316 857 aaKnown RBP11.29□□□□□ -0.6
COL4A4-201ENST00000396625 ANO3Q9BYT9 981 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 ABCB4P21439 1286 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 ART3Q13508 389 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 SYCE1LA8MT33 242 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 HLA-DPA1P20036 260 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 CDKL2Q92772 493 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 KCTD16Q68DU8 428 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 ST7Q9NRC1 585 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 EFCAB8A8MWE9 144 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
COL4A4-201ENST00000396625 EXOC3O60645 756 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 GNA14O95837 355 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 IQCB1Q15051 598 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 FBXL13Q8NEE6 735 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
COL4A4-201ENST00000396625 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 PPP4R4Q6NUP7 873 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 CUTAO60888 179 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
COL4A4-201ENST00000396625 COPG1Q9Y678 874 aaKnown RBP11.29□□□□□ -0.6
COL4A4-201ENST00000396625 MAGEA1P43355 309 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 PMS1P54277 932 aaKnown RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 MLKLQ8NB16 471 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 MAML1Q92585 1016 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 CAPN11Q9UMQ6 739 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 MED10Q9BTT4 135 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 ANGPTL3Q9Y5C1 460 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 TNNI1P19237 187 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 ADKP55263 362 aaKnown RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 MRPL28Q13084 256 aaKnown RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 NME8Q8N427 588 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 DEXIO95424 95 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 XRCC5P13010 732 aaKnown RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 ADAT2Q7Z6V5 191 aaKnown RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 MYH11P35749 1972 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 MYO18AQ92614 2054 aaKnown RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 OCA2Q04671 838 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 GRM8O00222 908 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 SERPINI1Q99574 410 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 KIF17Q9P2E2 1029 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 TROQ12816 1431 aaPredicted RBP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 KCNJ18B7U540 433 aa11.28□□□□□ -0.6
COL4A4-201ENST00000396625 YWHAGP61981 247 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL4A4-201ENST00000396625 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms