RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 KAT14Q9H8E8 782 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 CNNM1Q9NRU3 951 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 ABHD10Q9NUJ1 306 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 EPN1Q9Y6I3 576 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-203ENST00000396547 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 ARHGAP25P42331 645 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 C2orf54Q08AI8 447 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 BCAS4Q8TDM0 211 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 NAA15Q9BXJ9 866 aaKnown RBP11.08□□□□□ -0.64
TRIM39-203ENST00000396547 ARMT1Q9H993 441 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
TRIM39-203ENST00000396547 GOLGA6CA6NDK9 693 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 PRKAB2O43741 272 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 ERLIN2O94905 339 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 GOLGA6DP0CG33 693 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 ERCC5P28715 1186 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-203ENST00000396547 RILPL1Q5EBL4 403 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
TRIM39-203ENST00000396547 LRP10Q7Z4F1 713 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 IFNL2Q8IZJ0 200 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 FAM76AQ8TAV0 307 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 MED4Q9NPJ6 270 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 GOLGA6AQ9NYA3 693 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 H0YHG0 523 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 GUCY2CP25092 1073 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 TDO2P48775 406 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 SLC7A5Q01650 507 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 CYP27A1Q02318 531 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 PPARAQ07869 468 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 KANK3Q6NY19 840 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 SND1Q7KZF4 910 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIM39-203ENST00000396547 ANKRD20A12PQ8NF67 263 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 KCNG1Q9UIX4 513 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 SAR1BQ9Y6B6 198 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 DUSP10Q9Y6W6 482 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 EP400Q96L91 3159 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 EBAG9O00559 213 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 ZEB2O60315 1214 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 USP14P54578 494 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
TRIM39-203ENST00000396547 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
TRIM39-203ENST00000396547 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
TRIM39-203ENST00000396547 SRPRBQ9Y5M8 271 aaKnown RBP11.07□□□□□ -0.64
TRIM39-203ENST00000396547 FAM237AA0A1B0GTK4 181 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 ERICH2A1L162 156 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 ATP1A2P50993 1020 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 COPB1P53618 953 aaKnown RBP11.06□□□□□ -0.64
TRIM39-203ENST00000396547 WTAPQ15007 396 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 MAP9Q49MG5 647 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 KCTD16Q68DU8 428 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 FBXL16Q8N461 479 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 MIGA1Q8NAN2 632 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 FAM107BQ9H098 131 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 SMARCAL1Q9NZC9 954 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 GOLGA6BA6NDN3 693 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 WNT7AO00755 349 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 MBD4O95243 580 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 NDUFA10O95299 355 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-203ENST00000396547 ERCC3P19447 782 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 CXCR5P32302 372 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 GNGT1P63211 74 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
TRIM39-203ENST00000396547 MFSD6Q6ZSS7 791 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 WASF1Q92558 559 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 JAKMIP2Q96AA8 810 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 SELENOOQ9BVL4 669 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 MYH15Q9Y2K3 1946 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 TTC26A0AVF1 554 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 KCNJ18B7U540 433 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 TRIM37O94972 964 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
TRIM39-203ENST00000396547 KCNJ12Q14500 433 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 HOMEZQ8IX15 550 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 MAGEB6Q8N7X4 407 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 TRIML1Q8N9V2 468 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 SMCR8Q8TEV9 937 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-203ENST00000396547 NELFBQ8WX92 580 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 TMEM87BQ96K49 555 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 CEP131Q9UPN4 1083 aa11.06□□□□□ -0.64
TRIM39-203ENST00000396547 ADD2P35612 726 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 PHKA1P46020 1223 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 CUL4BQ13620 913 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 PROM2Q8N271 834 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms