RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 AATFQ9NY61 560 aaKnown RBP eCLIP10.55□□□□□ -0.72
NDE1-201ENST00000396354 IMPACTQ9P2X3 320 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 MYH6P13533 1939 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 CASP14P31944 242 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 SPECC1LQ69YQ0 1117 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 ENAHQ8N8S7 591 aaPredicted RBP10.55□□□□□ -0.72
NDE1-201ENST00000396354 TRIM10Q9UDY6 481 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 NID2Q14112 1375 aa10.55□□□□□ -0.72
NDE1-201ENST00000396354 N4BP3O15049 544 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 APBA3O96018 575 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 MMP1P03956 469 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 RRAGBQ5VZM2 374 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 CTR9Q6PD62 1173 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 FANCBQ8NB91 859 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 PSMB7Q99436 277 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 PCNTO95613 3336 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 PP2D1A8MPX8 630 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 ZSCAN12O43309 604 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 RAD21O60216 631 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 CUTAO60888 179 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 LMAN1P49257 510 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 IFIT1BQ5T764 474 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 DCAF8Q5TAQ9 597 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 TRIM65Q6PJ69 517 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 REXO1L1PQ8IX06 675 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 SLF1Q9BQI6 1058 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 HOOK1Q9UJC3 728 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 MORC2Q9Y6X9 1032 aaPredicted RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 LAMB1P07942 1786 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 OAS2P29728 719 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 FUT2Q10981 343 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 UTP14CQ5TAP6 766 aaKnown RBP10.54□□□□□ -0.72
NDE1-201ENST00000396354 RASGRP2Q7LDG7 609 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 MED15Q96RN5 788 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 GUCA1BQ9UMX6 200 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 FHOD1Q9Y613 1164 aa10.54□□□□□ -0.72
NDE1-201ENST00000396354 TRIM75PA6NK02 468 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 USP17L21D6R901 530 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 ZPR1O75312 459 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 SASH3O75995 380 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 TC2NQ8N9U0 490 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 NLRP3Q96P20 1036 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
NDE1-201ENST00000396354 TRIM49BA6NDI0 452 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 IFNAR1P17181 557 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 NLRP5P59047 1200 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 PARD6BQ9BYG5 372 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 ANAPC4Q9UJX5 808 aa10.53□□□□□ -0.72
NDE1-201ENST00000396354 KIF2AO00139 706 aaPredicted RBP10.52□□□□□ -0.72
NDE1-201ENST00000396354 ARHGAP6O43182 974 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 PLA2G4AP47712 749 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.72
NDE1-201ENST00000396354 PKN1Q16512 942 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 RAD9BQ6WBX8 426 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 CRACR2BQ8N4Y2 399 aaPredicted RBP10.52□□□□□ -0.72
NDE1-201ENST00000396354 CCDC102AQ96A19 550 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 KRT23Q9C075 422 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 FBXO2Q9UK22 296 aaPredicted RBP10.52□□□□□ -0.72
NDE1-201ENST00000396354 SYNRGQ9UMZ2 1314 aa10.52□□□□□ -0.72
NDE1-201ENST00000396354 PSDA5PKW4 1024 aaPredicted RBP10.52□□□□□ -0.73
NDE1-201ENST00000396354 KIF20AO95235 890 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 GOLGA8HP0CJ92 632 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 GNAT2P19087 354 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 PTGDRQ13258 359 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 TXNRD1Q16881 649 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 CAVIN4Q5BKX8 364 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
NDE1-201ENST00000396354 TUBE1Q9UJT0 475 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 HPSEQ9Y251 543 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 GDAQ9Y2T3 454 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 IKBKBO14920 756 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 HIBADHP31937 336 aaKnown RBP10.52□□□□□ -0.73
NDE1-201ENST00000396354 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.731e-9■■■■■ 34.8
NDE1-201ENST00000396354 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 RGS22Q8NE09 1264 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
NDE1-201ENST00000396354 CNNM2Q9H8M5 875 aa10.52□□□□□ -0.73
NDE1-201ENST00000396354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.52□□□□□ -0.736e-6■■□□□ 13.9
NDE1-201ENST00000396354 AKR1B15C9JRZ8 316 aaPredicted RBP10.51□□□□□ -0.73
NDE1-201ENST00000396354 SRGAP2O75044 1071 aa10.51□□□□□ -0.73
NDE1-201ENST00000396354 N4BP1O75113 896 aaKnown RBP10.51□□□□□ -0.73
NDE1-201ENST00000396354 PPP6R2O75170 966 aa10.51□□□□□ -0.73
NDE1-201ENST00000396354 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
NDE1-201ENST00000396354 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
NDE1-201ENST00000396354 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
NDE1-201ENST00000396354 FXR1P51114 621 aaKnown RBP eCLIP10.51□□□□□ -0.73
NDE1-201ENST00000396354 DPYDQ12882 1025 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms