RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 KDM5CP41229 1560 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 PHLDB2Q86SQ0 1253 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 TPH2Q8IWU9 490 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MYOCDQ8IZQ8 938 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 BLIDQ8IZY5 108 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 OR8K1Q8NGG5 319 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 METTL14Q9HCE5 456 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 PREX2Q70Z35 1606 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 ATP7BP35670 1465 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 KRT40Q6A162 431 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 GBP6Q6ZN66 633 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 NOSTRINQ8IVI9 506 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 IFNL3Q8IZI9 196 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 SLAIN2Q9P270 581 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 A0A1B0GUA9 196 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PFDN6O15212 129 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ZYXQ15942 572 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 C2CD5Q86YS7 1000 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 FAM81BQ96LP2 452 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 RUNDC3BQ96NL0 473 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 BEGAINQ9BUH8 593 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 BZW2Q9Y6E2 419 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 KRT19P08727 400 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 CPA1P15085 419 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 KRT15P19012 456 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 SEPT6Q14141 434 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 SND1Q7KZF4 910 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 KLHDC4Q8TBB5 520 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 MCUR1Q96AQ8 359 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 RAB3IPQ96QF0 476 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 RASSF4Q9H2L5 321 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 DDAH1O94760 285 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 HOXA7P31268 230 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 LONP1P36776 959 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 FAM98CQ17RN3 349 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 CERKLQ49MI3 558 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 NEK8Q86SG6 692 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ZFP91Q96JP5 570 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 AK8Q96MA6 479 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ADPGKQ9BRR6 497 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 CACYBPQ9HB71 228 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 TNNQ9UQP3 1299 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 THAP12O43422 761 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 MYRIPQ8NFW9 859 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 DEPTORQ8TB45 409 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ARHGEF2Q92974 986 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PANK4Q9NVE7 773 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 DDX25Q9UHL0 483 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ME3Q16798 604 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 GPATCH4Q5T3I0 446 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ZBTB8OSQ8IWT0 167 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 EXOC8Q8IYI6 725 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ORAI2Q96SN7 254 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 NUF2Q9BZD4 464 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 USP21Q9UK80 565 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 EFCAB6Q5THR3 1501 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PSDA5PKW4 1024 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PPIP5K2O43314 1243 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 TRIM37O94972 964 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 SSH3Q8TE77 659 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PPP4R1Q8TF05 950 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 DDX41Q9UJV9 622 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 NT5C2P49902 561 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 MAPKAPK5Q8IW41 473 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 LMNTD2Q8IXW0 634 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PROCA1Q8NCQ7 364 aaPredicted RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 CABS1Q96KC9 395 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 USP17L12C9JPN9 530 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 USP17L21D6R901 530 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 CEP104O60308 925 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 POLR2BP30876 1174 aaKnown RBP6.01□□□□□ -1.45
VPS13C-204ENST00000395898 LIG4P49917 911 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 HHATQ5VTY9 493 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 ANKRD20A3Q5VUR7 823 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 MYSM1Q5VVJ2 828 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 RRAGAQ7L523 313 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 FAM178BQ8IXR5 827 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 MLXIPQ9HAP2 919 aa6.01□□□□□ -1.45
VPS13C-204ENST00000395898 PLEKHG3A1L390 1219 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 EIF3CLB5ME19 914 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 SEMA3EO15041 775 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 MAP3K21Q5TCX8 1036 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 EIF3CQ99613 913 aaKnown RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 CUEDC2Q9H467 287 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 ZSWIM6Q9HCJ5 1215 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 ARMCX3Q9UH62 379 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 ABCC4O15439 1325 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 KIF3CO14782 793 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 CAPN9O14815 690 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 PRDM1O75626 825 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 PDE6CP51160 858 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TYW1BQ6NUM6 668 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 PDZD4Q76G19 769 aaPredicted RBP6□□□□□ -1.45
VPS13C-204ENST00000395898 PNMA1Q8ND90 353 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 GLG1Q92896 1179 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 CSRNP1Q96S65 589 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 TBC1D7Q9P0N9 293 aa6□□□□□ -1.45
VPS13C-204ENST00000395898 KLRF2D3W0D1 207 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms