RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 GPRC5AQ8NFJ5 357 aa19.48■□□□□ 0.71
CXCL1-201ENST00000395761 NCOA7Q8NI08 942 aa19.48■□□□□ 0.71
CXCL1-201ENST00000395761 ATG4CQ96DT6 458 aa19.48■□□□□ 0.71
CXCL1-201ENST00000395761 BTBD7Q9P203 1132 aa19.48■□□□□ 0.71
CXCL1-201ENST00000395761 ZSWIM8A7E2V4 1837 aa19.48■□□□□ 0.71
CXCL1-201ENST00000395761 FMNL1O95466 1100 aaPredicted RBP19.47■□□□□ 0.71
CXCL1-201ENST00000395761 BMP3P12645 472 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 CHST3Q7LGC8 479 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 RALYLQ86SE5 291 aaKnown RBP19.47■□□□□ 0.71
CXCL1-201ENST00000395761 RASEFQ8IZ41 740 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 ENAHQ8N8S7 591 aaPredicted RBP19.47■□□□□ 0.71
CXCL1-201ENST00000395761 GTF3C2Q8WUA4 911 aaPredicted RBP19.47■□□□□ 0.71
CXCL1-201ENST00000395761 ANKS1AQ92625 1134 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 MCOLN1Q9GZU1 580 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 TNKSO95271 1327 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 RLFQ13129 1914 aa19.47■□□□□ 0.71
CXCL1-201ENST00000395761 SLC1A4P43007 532 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 ANTXR2P58335 489 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 ERVK-9P63128 1117 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 ERVK-24P63145 666 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 CCDC178Q5BJE1 867 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 MB21D2Q8IYB1 491 aaPredicted RBP19.46■□□□□ 0.71
CXCL1-201ENST00000395761 TNS4Q8IZW8 715 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 GMCL1Q96IK5 515 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 UBAC1Q9BSL1 405 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 PPP1R9AQ9ULJ8 1098 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 ADAMTS5Q9UNA0 930 aa19.46■□□□□ 0.71
CXCL1-201ENST00000395761 TMEM232C9JQI7 657 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 REC8O95072 547 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 FCGRTP55899 365 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 SEC23AQ15436 765 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 KCTD1Q719H9 257 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 SLF1Q9BQI6 1058 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 SENP2Q9HC62 589 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
CXCL1-201ENST00000395761 MYPNQ86TC9 1320 aa19.45■□□□□ 0.7
CXCL1-201ENST00000395761 ARHGEF6Q15052 776 aa19.44■□□□□ 0.7
CXCL1-201ENST00000395761 PORCNQ9H237 461 aa19.44■□□□□ 0.7
CXCL1-201ENST00000395761 FEM1BQ9UK73 627 aa19.44■□□□□ 0.7
CXCL1-201ENST00000395761 PTPN22Q9Y2R2 807 aa19.44■□□□□ 0.7
CXCL1-201ENST00000395761 VWA5AO00534 786 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 TNPO2O14787 897 aaKnown RBP19.43■□□□□ 0.7
CXCL1-201ENST00000395761 IFIT3O14879 490 aaKnown RBP19.43■□□□□ 0.7
CXCL1-201ENST00000395761 HSPA4P34932 840 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 TMEM132BQ14DG7 1078 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 CCDC96Q2M329 555 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 ADCK5Q3MIX3 580 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 TTBK2Q6IQ55 1244 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 PRPF38AQ8NAV1 312 aaKnown RBP19.43■□□□□ 0.7
CXCL1-201ENST00000395761 DCAF4Q8WV16 495 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 KCNB2Q92953 911 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 KIFC2Q96AC6 838 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 USP26Q9BXU7 913 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 KAT14Q9H8E8 782 aa19.43■□□□□ 0.7
CXCL1-201ENST00000395761 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
CXCL1-201ENST00000395761 GNRH1P01148 92 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 PDHBP11177 359 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 PKN2Q16513 984 aaKnown RBP19.42■□□□□ 0.7
CXCL1-201ENST00000395761 TSGA10IPQ3SY00 556 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 IFIT1BQ5T764 474 aaKnown RBP19.42■□□□□ 0.7
CXCL1-201ENST00000395761 MB21D1Q8N884 522 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 PNMA1Q8ND90 353 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 REPS2Q8NFH8 660 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 IGDCC4Q8TDY8 1250 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 GPCPD1Q9NPB8 672 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 SRRDQ9UH36 339 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 GABRQQ9UN88 632 aa19.42■□□□□ 0.7
CXCL1-201ENST00000395761 FRMPD2Q68DX3 1309 aaPredicted RBP19.42■□□□□ 0.7
CXCL1-201ENST00000395761 PARP14Q460N5 1801 aa19.41■□□□□ 0.7
CXCL1-201ENST00000395761 PRC1O43663 620 aa19.41■□□□□ 0.7
CXCL1-201ENST00000395761 SNHG28P0DPA3 235 aa19.41■□□□□ 0.7
CXCL1-201ENST00000395761 PRKCZQ05513 592 aa19.41■□□□□ 0.7
CXCL1-201ENST00000395761 PLS1Q14651 629 aa19.41■□□□□ 0.7
CXCL1-201ENST00000395761 FBXO46Q6PJ61 603 aaPredicted RBP19.41■□□□□ 0.7
CXCL1-201ENST00000395761 MOV10L1Q9BXT6 1211 aaKnown RBP19.41■□□□□ 0.7
CXCL1-201ENST00000395761 SPATC1LQ9H0A9 340 aa19.41■□□□□ 0.7
CXCL1-201ENST00000395761 PLA2G6O60733 806 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 ZKSCAN1P17029 563 aaPredicted RBP19.4■□□□□ 0.7
CXCL1-201ENST00000395761 HOXD10P28358 340 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 MCM5P33992 734 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 SLC16A2P36021 539 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 STAT2P52630 851 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 CCNA1P78396 465 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 ZNF543Q08ER8 600 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 IKQ13123 557 aaPredicted RBP19.4■□□□□ 0.7
CXCL1-201ENST00000395761 C8orf34Q49A92 452 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 TMEM67Q5HYA8 995 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 FAM160B2Q86V87 743 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 CHURC1Q8WUH1 139 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 NEK1Q96PY6 1258 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 GJD2Q9UKL4 321 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 PTCH2Q9Y6C5 1203 aa19.4■□□□□ 0.7
CXCL1-201ENST00000395761 A0A0G2JMZ2 1700 aa19.39■□□□□ 0.7
CXCL1-201ENST00000395761 MGAMO43451 1857 aa19.39■□□□□ 0.7
CXCL1-201ENST00000395761 ERICH2A1L162 156 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 GOLGA8HP0CJ92 632 aa19.39■□□□□ 0.69
CXCL1-201ENST00000395761 MAPK4P31152 587 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms