RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 GRB14Q14449 540 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 COG2Q14746 738 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
TOM1-202ENST00000395736 IFNL3Q8IZI9 196 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 ATG4CQ96DT6 458 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 MOV10L1Q9BXT6 1211 aaKnown RBP13.18□□□□□ -0.3
TOM1-202ENST00000395736 SH2D4AQ9H788 454 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
TOM1-202ENST00000395736 PRDM1O75626 825 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 IGHA2P01877 340 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 TFRCP02786 760 aaKnown RBP13.17□□□□□ -0.3
TOM1-202ENST00000395736 GNAT2P19087 354 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 TDO2P48775 406 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 PDE1AP54750 535 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 CCNA1P78396 465 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 CACNB2Q08289 660 aaPredicted RBP13.17□□□□□ -0.3
TOM1-202ENST00000395736 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 CCAR1Q8IX12 1150 aaKnown RBP13.17□□□□□ -0.3
TOM1-202ENST00000395736 NPLOC4Q8TAT6 608 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
TOM1-202ENST00000395736 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 HMX1Q9NP08 348 aaPredicted RBP13.17□□□□□ -0.3
TOM1-202ENST00000395736 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
TOM1-202ENST00000395736 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
TOM1-202ENST00000395736 FLOT1O75955 427 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 HOXC6P09630 235 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 CCND3P30281 292 aaPredicted RBP13.16□□□□□ -0.3
TOM1-202ENST00000395736 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 SMC5Q8IY18 1101 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
TOM1-202ENST00000395736 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 ADAMTS5Q9UNA0 930 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 PLIN4Q96Q06 1357 aa13.16□□□□□ -0.3
TOM1-202ENST00000395736 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 IGHDP01880 384 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 APPP05067 770 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 ERCC3P19447 782 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 TMEM132BQ14DG7 1078 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
TOM1-202ENST00000395736 FAM83BQ5T0W9 1011 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 LHX8Q68G74 356 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 TRMT44Q8IYL2 757 aaKnown RBP13.15□□□□□ -0.3
TOM1-202ENST00000395736 MB21D1Q8N884 522 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 SHCBP1Q8NEM2 672 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 REPS2Q8NFH8 660 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
TOM1-202ENST00000395736 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
TOM1-202ENST00000395736 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
TOM1-202ENST00000395736 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
TOM1-202ENST00000395736 ADORA2AP29274 412 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 NECAB2Q7Z6G3 386 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 ANKLE1Q8NAG6 615 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 ZNF214Q9UL59 606 aaPredicted RBP13.14□□□□□ -0.31
TOM1-202ENST00000395736 PPP1R9AQ9ULJ8 1098 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 REV3LO60673 3130 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
TOM1-202ENST00000395736 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 COBLO75128 1261 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 NDUFB10O96000 172 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 CAPN2P17655 700 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 CYP2C19P33261 490 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 PPARAQ07869 468 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 AAMPQ13685 434 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
TOM1-202ENST00000395736 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 EVI5LQ96CN4 794 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 NAPBQ9H115 298 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
TOM1-202ENST00000395736 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
TOM1-202ENST00000395736 PFASO15067 1338 aa13.13□□□□□ -0.31
TOM1-202ENST00000395736 LAMA4Q16363 1823 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 F5H6K3 240 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 VWA5AO00534 786 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 RAD21O60216 631 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 KLRC3Q07444 240 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 PLS1Q14651 629 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 FAM47AQ5JRC9 791 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 NCAPG2Q86XI2 1143 aa13.12□□□□□ -0.31
TOM1-202ENST00000395736 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
TOM1-202ENST00000395736 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
TOM1-202ENST00000395736 NACAP1Q9BZK3 213 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms