RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 DIEXFQ68CQ4 756 aaKnown RBP7.6□□□□□ -1.19
PTPN20-208ENST00000395727 PRICKLE2Q7Z3G6 844 aa7.6□□□□□ -1.19
PTPN20-208ENST00000395727 FAM83AQ86UY5 434 aa7.6□□□□□ -1.19
PTPN20-208ENST00000395727 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
PTPN20-208ENST00000395727 WDR66Q8TBY9 1149 aa7.6□□□□□ -1.19
PTPN20-208ENST00000395727 TEKT1Q969V4 418 aa7.6□□□□□ -1.19
PTPN20-208ENST00000395727 ZDHHC15Q96MV8 337 aa7.6□□□□□ -1.19
PTPN20-208ENST00000395727 TEPSINQ96N21 525 aa7.6□□□□□ -1.19
PTPN20-208ENST00000395727 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
PTPN20-208ENST00000395727 ZNF70Q9UC06 446 aaPredicted RBP7.6□□□□□ -1.19
PTPN20-208ENST00000395727 NOVA2Q9UNW9 492 aaKnown RBP7.6□□□□□ -1.19
PTPN20-208ENST00000395727 AOX1Q06278 1338 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 F8W031 263 aaPredicted RBP7.59□□□□□ -1.19
PTPN20-208ENST00000395727 UBE2Q2LH0YL09 131 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 TNNI2P48788 182 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 RASA3Q14644 834 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 ATP2B3Q16720 1220 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
PTPN20-208ENST00000395727 RNF186Q9NXI6 227 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 RBM19Q9Y4C8 960 aaKnown RBP7.59□□□□□ -1.19
PTPN20-208ENST00000395727 PCDHAC2Q9Y5I4 1007 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
PTPN20-208ENST00000395727 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 MANSC4A6NHS7 340 aaPredicted RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 IGSF3O75054 1194 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 FRAT2O75474 233 aaPredicted RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 GNAI2P04899 355 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 IREB2P48200 963 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 RBM5P52756 815 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 HNRNPUQ00839 825 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 PTSQ03393 145 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 POU4F2Q12837 409 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 GRIK5Q16478 980 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 NBPF12Q5TAG4 269 aaPredicted RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 PRAMEF18Q5VWM3 479 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 ZKSCAN2Q63HK3 967 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 APOBEC3HQ6NTF7 200 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 MOB2Q70IA6 237 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 ANKRD13AQ8IZ07 590 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 ZGPATQ8N5A5 531 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 FAM200AQ8TCP9 573 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 HOOK2Q96ED9 719 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 ABHD8Q96I13 439 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 TDRD3Q9H7E2 651 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 VEZTQ9HBM0 779 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 GNL3LQ9NVN8 582 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 DENND2AQ9ULE3 1009 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 ANGEL1Q9UNK9 670 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 SCAF8Q9UPN6 1271 aaKnown RBP7.58□□□□□ -1.2
PTPN20-208ENST00000395727 JAG2Q9Y219 1238 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 RFX7Q2KHR2 1363 aa7.58□□□□□ -1.2
PTPN20-208ENST00000395727 GAKO14976 1311 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 MAST2Q6P0Q8 1798 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 SLC35F4A4IF30 521 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 SRGAP3O43295 1099 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 USP2O75604 605 aaPredicted RBP7.57□□□□□ -1.2
PTPN20-208ENST00000395727 TRPA1O75762 1119 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 BCAR3O75815 825 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 RHOQP17081 205 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 CHAF1AQ13111 956 aaPredicted RBP7.57□□□□□ -1.2
PTPN20-208ENST00000395727 C4orf17Q53FE4 359 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
PTPN20-208ENST00000395727 TAS1R3Q7RTX0 852 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPN20-208ENST00000395727 STK32AQ8WU08 396 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 WNK4Q96J92 1243 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 SIL1Q9H173 461 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 GPR108Q9NPR9 543 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 TMOD2Q9NZR1 351 aa7.57□□□□□ -1.2
PTPN20-208ENST00000395727 PA2G4Q9UQ80 394 aaKnown RBP7.57□□□□□ -1.2
PTPN20-208ENST00000395727 COL2A1P02458 1487 aaPredicted RBP7.56□□□□□ -1.2
PTPN20-208ENST00000395727 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 MAP4K4O95819 1239 aaPredicted RBP7.56□□□□□ -1.2
PTPN20-208ENST00000395727 PRDX5P30044 214 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 PHKA1P46020 1223 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 RGS19P49795 217 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 MVPQ14764 893 aaKnown RBP7.56□□□□□ -1.2
PTPN20-208ENST00000395727 PKN2Q16513 984 aaKnown RBP7.56□□□□□ -1.2
PTPN20-208ENST00000395727 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 TMEM57Q8N5G2 664 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 SSH3Q8TE77 659 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 MCOLN1Q9GZU1 580 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 ZCCHC17Q9NP64 241 aaKnown RBP7.56□□□□□ -1.2
PTPN20-208ENST00000395727 DAGLAQ9Y4D2 1042 aa7.56□□□□□ -1.2
PTPN20-208ENST00000395727 DOCK2Q92608 1830 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 PNMA6EA0A0J9YXQ4 647 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
PTPN20-208ENST00000395727 ARID4AP29374 1257 aaPredicted RBP7.55□□□□□ -1.2
PTPN20-208ENST00000395727 DGKZQ13574 1117 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 RASGRF1Q13972 1273 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 TMEM164Q5U3C3 297 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.55□□□□□ -1.2
PTPN20-208ENST00000395727 CTU1Q7Z7A3 348 aaKnown RBP7.55□□□□□ -1.2
PTPN20-208ENST00000395727 FAM151AQ8WW52 585 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 FRAT1Q92837 279 aaPredicted RBP7.55□□□□□ -1.2
PTPN20-208ENST00000395727 CLMNQ96JQ2 1002 aa7.55□□□□□ -1.2
PTPN20-208ENST00000395727 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms