RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 PLSCR1O15162 318 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 TBC1D8BQ0IIM8 1120 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 CCDC125Q86Z20 511 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 NOP53Q9NZM5 478 aaKnown RBP12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 H0YIN7 160 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC38Q502W7 563 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 PAPOLBQ9NRJ5 636 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 DACH1Q9UI36 760 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 PAFAH1B1P43034 410 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 PAPOLAP51003 745 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 MYL5Q02045 173 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 TAF11Q15544 211 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 ZNF365Q70YC5 407 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 EIF3HO15372 352 aaKnown RBP eCLIP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 PYGLP06737 847 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 GNAT1P11488 350 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 PTF1AQ7RTS3 328 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 IL17RAQ96F46 866 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 ABCF2Q9UG63 623 aa12.64□□□□□ -0.39
RAPGEF3-202ENST00000395358 EME2A4GXA9 379 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 CETN3O15182 167 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 DNA2P51530 1060 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 ATP11AP98196 1134 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC6Q16204 474 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 L1RE1Q9UN81 338 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 STK38LQ9Y2H1 464 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 USH1CQ9Y6N9 552 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 CA8P35219 290 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 SMTNP53814 917 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 USP4Q13107 963 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 LONRF3Q496Y0 759 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 KCNV1Q6PIU1 500 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 RUFY3Q7L099 469 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 TRIM42Q8IWZ5 723 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 RGL1Q9NZL6 768 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 MMP10P09238 476 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 ARHGAP22Q7Z5H3 698 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 COPRSQ9NQ92 184 aa12.63□□□□□ -0.39
RAPGEF3-202ENST00000395358 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 ICA1Q05084 483 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 SLMAPQ14BN4 828 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 CYB5D1Q6P9G0 228 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 HOOK2Q96ED9 719 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 TSGA10Q9BZW7 698 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 KDM4CQ9H3R0 1056 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 GREM2Q9H772 168 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 hCG_2014768A0A024R1R8 64 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 VAV2P52735 878 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 IFT81Q8WYA0 676 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 ABTB1Q969K4 478 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 TCHPQ9BT92 498 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 PRDM16Q9HAZ2 1276 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 ATP6V0A4Q9HBG4 840 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 A1CFQ9NQ94 594 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 FANCLQ9NW38 375 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 CDC25CP30307 473 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 CCDC13Q8IYE1 715 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 SLC35F6Q8N357 371 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 ALDH1B1P30837 517 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 SDCCAG8Q86SQ7 713 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 GBP5Q96PP8 586 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 PICK1Q9NRD5 415 aa12.62□□□□□ -0.39
RAPGEF3-202ENST00000395358 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 USP5P45974 858 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 IQCB1Q15051 598 aa12.61□□□□□ -0.39
RAPGEF3-202ENST00000395358 ZNF34Q8IZ26 560 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms