RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 TTC22Q5TAA0 569 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 SHCBP1Q8NEM2 672 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 ATG4CQ96DT6 458 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 SPATC1LQ9H0A9 340 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 STRNO43815 780 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 NDUFB10O96000 172 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 HMGCRP04035 888 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 RGS2P41220 211 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 MAP2K5Q13163 448 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 PPP1R9AQ9ULJ8 1098 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 TACC3Q9Y6A5 838 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 IVNS1ABPQ9Y6Y0 642 aa16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 MKI67P46013 3256 aaKnown RBP16.58■□□□□ 0.24
HLA-DMA-203ENST00000395305 VWA5AO00534 786 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 SGPL1O95470 568 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 PCP11498 1178 aaKnown RBP16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 WDR78Q5VTH9 848 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 GMCL1P1Q8NEA9 526 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 MROH8Q9H579 483 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
HLA-DMA-203ENST00000395305 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 SLC25A27O95847 323 aa16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 GSPT1P15170 499 aaKnown RBP16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 NOVP48745 357 aa16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 GRB14Q14449 540 aa16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 TMEM132BQ14DG7 1078 aa16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 TRIB2Q92519 343 aa16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 NUP88Q99567 741 aaPredicted RBP16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 PAK6Q9NQU5 681 aaPredicted RBP16.56■□□□□ 0.24
HLA-DMA-203ENST00000395305 ZNF213O14771 459 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 HOXC6P09630 235 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 ERCC3P19447 782 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 HAND2P61296 217 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 PLS1Q14651 629 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 SLFN13Q68D06 897 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 MFSD6Q6ZSS7 791 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 U2AF1L4Q8WU68 220 aaKnown RBP16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 APBA2Q99767 749 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 SLF1Q9BQI6 1058 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 HMX1Q9NP08 348 aaPredicted RBP16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 TCP11L1Q9NUJ3 509 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 FEM1BQ9UK73 627 aa16.55■□□□□ 0.24
HLA-DMA-203ENST00000395305 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 STAT3P40763 770 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 TRIM32Q13049 653 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 MAP3K21Q5TCX8 1036 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 RIOX2Q8IUF8 465 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 ABRAQ8N0Z2 381 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 LRRC47Q8N1G4 583 aaKnown RBP16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 REPS2Q8NFH8 660 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 STX8Q9UNK0 236 aa16.54■□□□□ 0.24
HLA-DMA-203ENST00000395305 NMT2O60551 498 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 ZBED4O75132 1171 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 TFRCP02786 760 aaKnown RBP16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 BMP3P12645 472 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 COPB2P35606 906 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 NT5C2P49902 561 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 CCL14Q16627 93 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 RRP12Q5JTH9 1297 aaKnown RBP16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 DPP9Q86TI2 863 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 NCAPG2Q86XI2 1143 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 SHISA4Q96DD7 197 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 TTC14Q96N46 770 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 DEFB118Q96PH6 123 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 NBPF3Q9H094 633 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 CRISPLD2Q9H0B8 497 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 ZNF214Q9UL59 606 aaPredicted RBP16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
HLA-DMA-203ENST00000395305 ATP2A1O14983 1001 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 PLA2G6O60733 806 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 FDX1P10109 184 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 FCER1AP12319 257 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 PRKAR2AP13861 404 aaKnown RBP16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 MCCP23508 829 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 CHMLP26374 656 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 ADORA2AP29274 412 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 MFSD14CQ5VZR4 134 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 NPLOC4Q8TAT6 608 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms