RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 GPS2Q13227 327 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 TBC1D16Q8TBP0 767 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 FANCLQ9NW38 375 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 FANCCQ00597 558 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 SYCP1Q15431 976 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 PTPN21Q16825 1174 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 CAVIN4Q5BKX8 364 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 TPTE2Q6XPS3 522 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 ENOX1Q8TC92 643 aaKnown RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 MTMR8Q96EF0 704 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 OGFRQ9NZT2 677 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 BIN1O00499 593 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 SMC2O95347 1197 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 SYMPKQ92797 1274 aaKnown RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 MMTAG2Q9BU76 263 aaKnown RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 ARGLU1Q9NWB6 273 aaPredicted RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 CALCOCO1Q9P1Z2 691 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 JAG2Q9Y219 1238 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 V9GY48 417 aaPredicted RBP11.72□□□□□ -0.53
HIF1A-203ENST00000394997 MINDY4BA8MYZ0 360 aa11.71□□□□□ -0.53
HIF1A-203ENST00000394997 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
HIF1A-203ENST00000394997 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.53
HIF1A-203ENST00000394997 POLR2DO15514 142 aaKnown RBP11.71□□□□□ -0.53
HIF1A-203ENST00000394997 CEP135Q66GS9 1140 aa11.71□□□□□ -0.53
HIF1A-203ENST00000394997 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
HIF1A-203ENST00000394997 TMEM60Q9H2L4 133 aa11.71□□□□□ -0.53
HIF1A-203ENST00000394997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.54
HIF1A-203ENST00000394997 SCG2P13521 617 aa11.71□□□□□ -0.54
HIF1A-203ENST00000394997 IFIT1BQ5T764 474 aaKnown RBP11.71□□□□□ -0.54
HIF1A-203ENST00000394997 SEPT12Q8IYM1 358 aa11.71□□□□□ -0.54
HIF1A-203ENST00000394997 COL2A1P02458 1487 aaPredicted RBP11.71□□□□□ -0.54
HIF1A-203ENST00000394997 WDR90Q96KV7 1748 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 A0A0U1RQJ8 604 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 SLFN14P0C7P3 912 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 ATRIPQ8WXE1 791 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 WASF1Q92558 559 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 NGLY1Q96IV0 654 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 MYO1BO43795 1136 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 HSPA1LP34931 641 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 KRT2P35908 639 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 OLFM4Q6UX06 510 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 SIAH1Q8IUQ4 282 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 TMEM47Q9BQJ4 181 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 NOL10Q9BSC4 688 aaKnown RBP11.7□□□□□ -0.54
HIF1A-203ENST00000394997 ZMYND12Q9H0C1 365 aa11.7□□□□□ -0.54
HIF1A-203ENST00000394997 MYL5Q02045 173 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 EHHADHQ08426 723 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 GOLGA8FQ08AF8 430 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 GOLGA8DPQ0D2H9 430 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 SF3B2Q13435 895 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 ISM2Q6H9L7 571 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 FEZ1Q99689 392 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 ZNFX1Q9P2E3 1918 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 P2RX7Q99572 595 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 ADD3Q9UEY8 706 aaKnown RBP11.69□□□□□ -0.54
HIF1A-203ENST00000394997 CALM1P0DP23 149 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 CALM2P0DP24 149 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 CALM3P0DP25 149 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 NFXL1Q6ZNB6 911 aa11.69□□□□□ -0.54
HIF1A-203ENST00000394997 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
HIF1A-203ENST00000394997 TRAPPC10P48553 1259 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 TRAPPC3LQ5T215 181 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 CCDC196A0A1B0GTZ2 297 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 PMS1P54277 932 aaKnown RBP11.68□□□□□ -0.54
HIF1A-203ENST00000394997 TPM4P67936 248 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 PTGDRQ13258 359 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 CT47A1Q5JQC4 288 aaPredicted RBP11.68□□□□□ -0.54
HIF1A-203ENST00000394997 SYNE3Q6ZMZ3 975 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 CREBRFQ8IUR6 639 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 C7orf43Q8WVR3 580 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 ARID2Q68CP9 1835 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms