RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SEC23AQ15436 765 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 AXDND1Q5T1B0 1012 aaPredicted RBP18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 CCDC112Q8NEF3 446 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 PDLIM2Q96JY6 352 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 MAGEC2Q9UBF1 373 aaPredicted RBP18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 WNT7AO00755 349 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 DDAH1O94760 285 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 CRKP46108 304 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 REXO1Q8N1G1 1221 aaKnown RBP18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 IL17RBQ9NRM6 502 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 TAF1P21675 1872 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 ECE2O60344 883 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 OFD1O75665 1012 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 RASA1P20936 1047 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 ZFPM1Q8IX07 1006 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 CACNB1Q02641 598 aaPredicted RBP18■□□□□ 0.47
SMARCD1-202ENST00000394963 CCDC12Q8WUD4 166 aaPredicted RBP18■□□□□ 0.47
SMARCD1-202ENST00000394963 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 GNA11P29992 359 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 WWC2Q6AWC2 1192 aa18■□□□□ 0.47
SMARCD1-202ENST00000394963 SEPT2Q15019 361 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 TBCKQ8TEA7 893 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 COA1Q9GZY4 146 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 BMP2KQ9NSY1 1161 aaPredicted RBP17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 ZBTB21Q9ULJ3 1066 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 CFBP00751 764 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 SP4Q02446 784 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 NONOQ15233 471 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 KIFC2Q96AC6 838 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 ATP6V0A2Q9Y487 856 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L15C9J2P7 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L13C9JLJ4 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L11C9JVI0 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L18D6R9N7 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L22D6RA61 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L17D6RBQ6 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L19D6RCP7 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L20D6RJB6 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L24Q0WX57 530 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L6PQ6QN14 398 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 METTL16Q86W50 562 aaKnown RBP17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 ENGASEQ8NFI3 743 aa17.99■□□□□ 0.47
SMARCD1-202ENST00000394963 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 CBFA2T2O43439 604 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 SRGNP10124 158 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 DNA2P51530 1060 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 DLGAP5Q15398 846 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 JDP2Q8WYK2 163 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 CALML4Q96GE6 196 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 URI1O94763 535 aaPredicted RBP17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 NAP1L1P55209 391 aaKnown RBP17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 STIM1Q13586 685 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 TAB2Q9NYJ8 693 aa17.98■□□□□ 0.47
SMARCD1-202ENST00000394963 PPP6R2O75170 966 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 ICA1Q05084 483 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 FUCA2Q9BTY2 467 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 DDX4Q9NQI0 724 aaKnown RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 ADAMTS3O15072 1205 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 PTPREP23469 700 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 CCDC43Q96MW1 224 aaKnown RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 MAN1B1Q9UKM7 699 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 DDX39AO00148 427 aaKnown RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 SORBS3O60504 671 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 GH2P01242 217 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.474e-7■■□□□ 13.2
SMARCD1-202ENST00000394963 HOXA13P31271 388 aaPredicted RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 PKN1Q16512 942 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 CDC42EP5Q6NZY7 148 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 MAEAQ7L5Y9 396 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 SP8Q8IXZ3 490 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 DPF2Q92785 391 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 HPS3Q969F9 1004 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 DESI2Q9BSY9 194 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 MMRN2Q9H8L6 949 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 LZTFL1Q9NQ48 299 aa17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 XIRP1Q702N8 1843 aaKnown RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
SMARCD1-202ENST00000394963 USP17L10C9JJH3 530 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 CAVIN2O95810 425 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 PRAMEF18Q5VWM3 479 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 NEMFO60524 1076 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 TPM2P07951 284 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 MTIF2P46199 727 aaKnown RBP17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 EVCP57679 992 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 PLS1Q14651 629 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 DNAI1Q9UI46 699 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 GDAQ9Y2T3 454 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 PCDHA1Q9Y5I3 950 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 SLIT2O94813 1529 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 COL14A1Q05707 1796 aaKnown RBP17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 PFKFB3Q16875 520 aaPredicted RBP17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 SLFN13Q68D06 897 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 KANK3Q6NY19 840 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 CERS5Q8N5B7 392 aa17.96■□□□□ 0.47
SMARCD1-202ENST00000394963 ADCY7P51828 1080 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms