RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 RGS2P41220 211 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 ATP2B2Q01814 1243 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 FAM83BQ5T0W9 1011 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 ZNF589Q86UQ0 364 aaPredicted RBP10.59□□□□□ -0.71
ATG4A-205ENST00000394892 PLEKHM2Q8IWE5 1019 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 ARHGEF10LQ9HCE6 1279 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 NYAP2Q9P242 653 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 OGDHLQ9ULD0 1010 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 CEP290O15078 2479 aa10.59□□□□□ -0.71
ATG4A-205ENST00000394892 BAZ2AQ9UIF9 1905 aaKnown RBP10.58□□□□□ -0.72
ATG4A-205ENST00000394892 F5H6K3 240 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 VWA5AO00534 786 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-205ENST00000394892 GNAT2P19087 354 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 CYP2C19P33261 490 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 BMP8BP34820 402 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 TDO2P48775 406 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 CCNA1P78396 465 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 NUCB1Q02818 461 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 KLRC3Q07444 240 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 PPARAQ07869 468 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-205ENST00000394892 RASGRP2Q7LDG7 609 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 C7orf61Q8IZ16 206 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 SHCBP1Q8NEM2 672 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 MKL1Q969V6 931 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 IL17RBQ9NRM6 502 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 MTMR4Q9NYA4 1195 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 CLIP2Q9UDT6 1046 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 ZNF214Q9UL59 606 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-205ENST00000394892 PPP1R9AQ9ULJ8 1098 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 SUPT16HQ9Y5B9 1047 aaKnown RBP10.58□□□□□ -0.72
ATG4A-205ENST00000394892 PFASO15067 1338 aa10.58□□□□□ -0.72
ATG4A-205ENST00000394892 NMT2O60551 498 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 APPP05067 770 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 COL6A1P12109 1028 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 PDE4AP27815 886 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 ADORA2AP29274 412 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 NMIQ13287 307 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-205ENST00000394892 CHD1LQ86WJ1 897 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
ATG4A-205ENST00000394892 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 NEDD1Q8NHV4 660 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 C11orf49Q9H6J7 331 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 MKNK2Q9HBH9 465 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 RIPK3Q9Y572 518 aa10.57□□□□□ -0.72
ATG4A-205ENST00000394892 GREB1LQ9C091 1923 aaPredicted RBP10.56□□□□□ -0.72
ATG4A-205ENST00000394892 A0A0G2JMZ2 1700 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 FGRP09769 529 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 CYBAP13498 195 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 NOVP48745 357 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 TFAP4Q01664 338 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 ALX1Q15699 326 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 PRAMEF19Q5SWL8 479 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 RIOX2Q8IUF8 465 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
ATG4A-205ENST00000394892 LRRC47Q8N1G4 583 aaKnown RBP10.56□□□□□ -0.72
ATG4A-205ENST00000394892 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 IL25Q9H293 177 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 OSBPL3Q9H4L5 887 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 SH2D4AQ9H788 454 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
ATG4A-205ENST00000394892 SOX1O00570 391 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 FGAP02671 866 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 PGK2P07205 417 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 TAL1P17542 331 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 STAT3P40763 770 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 IRX6P78412 446 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 AAMPQ13685 434 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 PLS1Q14651 629 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 NCAPG2Q86XI2 1143 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 CHMP4CQ96CF2 233 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 FGD4Q96M96 766 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 GDF15Q99988 308 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 UBE2OQ9C0C9 1292 aaKnown RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 NAPBQ9H115 298 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 RWDD1Q9H446 243 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
ATG4A-205ENST00000394892 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-205ENST00000394892 STRNO43815 780 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 RAD21O60216 631 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 HSPD1P10809 573 aaKnown RBP10.54□□□□□ -0.72
ATG4A-205ENST00000394892 LRRFIP1Q32MZ4 808 aaKnown RBP10.54□□□□□ -0.72
ATG4A-205ENST00000394892 ZNF792Q3KQV3 632 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 LRIT3Q3SXY7 679 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 MCMDC2Q4G0Z9 681 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms