RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 RPS6KA1Q15418 735 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 MMEL1Q495T6 779 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 MRPL11Q9Y3B7 192 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 RAPGEF6Q8TEU7 1601 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ARHGAP42A6NI28 874 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 LIG4P49917 911 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 STX1BP61266 288 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CPSF3Q9UKF6 684 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 MAD1L1Q9Y6D9 718 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 NOS1P29475 1434 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 SMIM24O75264 130 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CCDC51Q96ER9 411 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 DACT1Q9NYF0 836 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 STAT1P42224 750 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 KHDRBS2Q5VWX1 349 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 TRIM58Q8NG06 486 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 SPZ1Q9BXG8 430 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 PPP2R5CQ13362 524 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 FAM47CQ5HY64 1035 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CDHR1Q96JP9 859 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 RUSC2Q8N2Y8 1516 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CUTAO60888 179 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 HOXB7P09629 217 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 PDE1AP54750 535 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 NOLC1Q14978 699 aaKnown RBP eCLIP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ELMOD1Q8N336 334 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 PDZD8Q8NEN9 1154 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 POMGNT1Q8WZA1 660 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 EMILIN1Q9Y6C2 1016 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 HPDP32754 393 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CACTINQ8WUQ7 758 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 NLRP7Q8WX94 980 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 BLMP54132 1417 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-205ENST00000394768 PLXNC1O60486 1568 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 A0A1B0GUL7 405 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 CHMP6Q96FZ7 201 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 PPP2R3AQ06190 1150 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 ADALQ6DHV7 355 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 DHX38Q92620 1227 aaKnown RBP8.15□□□□□ -1.1
SYNE2-205ENST00000394768 HDAC11Q96DB2 347 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 CLSTN2Q9H4D0 955 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 METTL14Q9HCE5 456 aaKnown RBP8.15□□□□□ -1.1
SYNE2-205ENST00000394768 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 SETD1BQ9UPS6 1966 aaKnown RBP8.15□□□□□ -1.1
SYNE2-205ENST00000394768 AK9Q5TCS8 1911 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 SPECC1L-ADORA2AF8WAN1 911 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 ECE1P42892 770 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 ATP8B2P98198 1209 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 ITKQ08881 620 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 RIMBP2O15034 1052 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 ANXA13P27216 316 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 IRX5P78411 483 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-205ENST00000394768 KIAA1841Q6NSI8 718 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 NUDT18Q6ZVK8 323 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 ACSBG1Q96GR2 724 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 GBP5Q96PP8 586 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 MID2Q9UJV3 735 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 PDE8AO60658 829 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 KLHL30Q0D2K2 578 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 DRP2Q13474 957 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 GIMAP6Q6P9H5 292 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 SNX29Q8TEQ0 813 aa8.15□□□□□ -1.1
SYNE2-205ENST00000394768 TMEM191BP0C7N4 346 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 SNX21Q969T3 373 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 ATP8A2Q9NTI2 1148 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 LRWD1Q9UFC0 647 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 ATP10DQ9P241 1426 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 USP14P54578 494 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 NCAPH2Q6IBW4 605 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 TRIM15Q9C019 465 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 NRBP2Q9NSY0 501 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 STX2P32856 288 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 POSTNQ15063 836 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 HERC4Q5GLZ8 1057 aaPredicted RBP8.15□□□□□ -1.11
SYNE2-205ENST00000394768 KLC3Q6P597 504 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 TMC4Q7Z404 712 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 KIFC3Q9BVG8 833 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.11
SYNE2-205ENST00000394768 KDM5AP29375 1690 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 SDSP20132 328 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 NOP14P78316 857 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 KRT33BQ14525 404 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 MUM1Q2TAK8 710 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 C4orf50Q6ZRC1 276 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 BZW1Q7L1Q6 419 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 AP5M1Q9H0R1 490 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 NT5C2P49902 561 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ANKRD44Q8N8A2 993 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
SYNE2-205ENST00000394768 VPS37BQ9H9H4 285 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
SYNE2-205ENST00000394768 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms