RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 MFAP3LO75121 409 aa20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 PLEKHA8P1O95397 391 aa20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 NOM1Q5C9Z4 860 aaKnown RBP20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 GSDMAQ96QA5 445 aa20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 CACNA1SQ13698 1873 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 EN1Q05925 392 aaPredicted RBP20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 ARFGAP3Q9NP61 516 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 IQSEC3Q9UPP2 1182 aaPredicted RBP20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 A0A1B0GUL6 1792 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 SEMA3EO15041 775 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 TXLNAP40222 546 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 SLC10A5Q5PT55 438 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 TPTE2Q6XPS3 522 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 TNFRSF25Q93038 417 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 CTAGE1Q96RT6 745 aa20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 ZSCAN10Q96SZ4 725 aaPredicted RBP20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 V9GY48 417 aaPredicted RBP20.8■□□□□ 0.92
PCDHA1-202ENST00000394633 MAGEB6P1A0A0J9YX57 407 aa20.79■□□□□ 0.92
PCDHA1-202ENST00000394633 OAS2P29728 719 aaKnown RBP20.79■□□□□ 0.92
PCDHA1-202ENST00000394633 CASP14P31944 242 aa20.79■□□□□ 0.92
PCDHA1-202ENST00000394633 ZNF174Q15697 407 aa20.79■□□□□ 0.92
PCDHA1-202ENST00000394633 EZH2Q15910 746 aaKnown RBP20.79■□□□□ 0.92
PCDHA1-202ENST00000394633 FUT8Q9BYC5 575 aa20.79■□□□□ 0.92
PCDHA1-202ENST00000394633 SMC1AQ14683 1233 aaKnown RBP20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 SF3B3Q15393 1217 aaKnown RBP20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 NPY5RQ15761 445 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 FILIP1LQ4L180 1135 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 RASGRP2Q7LDG7 609 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 SRGAP1Q7Z6B7 1085 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 COL23A1Q86Y22 540 aaPredicted RBP20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 STAMQ92783 540 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 ZSWIM4Q9H7M6 989 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 CTNND2Q9UQB3 1225 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 BMP15O95972 392 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 GYPCP04921 128 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 FXR1P51114 621 aaKnown RBP eCLIP20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 CHRNDQ07001 517 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 ZCCHC17Q9NP64 241 aaKnown RBP20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 XDHP47989 1333 aa20.78■□□□□ 0.92
PCDHA1-202ENST00000394633 CYP2D7A0A087X1C5 515 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 FECHP22830 423 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 CHMP4BP1P59074 171 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 DDR1Q08345 913 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 TTC38Q5R3I4 469 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 IFIT1BQ5T764 474 aaKnown RBP20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 RIOK1Q9BRS2 568 aaKnown RBP20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 ABCF2Q9UG63 623 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 ITIH6Q6UXX5 1313 aa20.77■□□□□ 0.92
PCDHA1-202ENST00000394633 KIF5CO60282 957 aa20.77■□□□□ 0.91
PCDHA1-202ENST00000394633 COBLO75128 1261 aa20.77■□□□□ 0.91
PCDHA1-202ENST00000394633 JAKMIP3Q5VZ66 844 aa20.77■□□□□ 0.91
PCDHA1-202ENST00000394633 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.91
PCDHA1-202ENST00000394633 CALCOCO1Q9P1Z2 691 aa20.77■□□□□ 0.91
PCDHA1-202ENST00000394633 CDC23Q9UJX2 597 aa20.77■□□□□ 0.91
PCDHA1-202ENST00000394633 TROAPQ12815 778 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 LONRF2Q1L5Z9 754 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 ZNF569Q5MCW4 686 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 PRR5LQ6MZQ0 368 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 CNGA4Q8IV77 575 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 CNBD1Q8NA66 436 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 COL1A1P02452 1464 aaPredicted RBP20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 CCDC151A5D8V7 595 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 CCT6AP40227 531 aaKnown RBP20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 ST5P78524 1137 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 ATP2C1P98194 919 aaPredicted RBP20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 PTGDRQ13258 359 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 E2F4Q16254 413 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 SLC51AQ86UW1 340 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 CCDC51Q96ER9 411 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 CAMKK2Q96RR4 588 aa20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
PCDHA1-202ENST00000394633 BAZ2BQ9UIF8 2168 aaKnown RBP20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 TM4SF1P30408 202 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 DYNLL1P63167 89 aaKnown RBP20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 BRD3Q15059 726 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 KRT31Q15323 416 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 BLZF1Q9H2G9 400 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 ANKZF1Q9H8Y5 726 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 BRMS1Q9HCU9 246 aa20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 LIMA1Q9UHB6 759 aaKnown RBP20.75■□□□□ 0.91
PCDHA1-202ENST00000394633 ZNF804BA4D1E1 1349 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 CNTNAP5Q8WYK1 1306 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 TMTC3Q6ZXV5 915 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 ACRBPQ8NEB7 543 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 WTIPA6NIX2 430 aaPredicted RBP20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 ERVK-24P63145 666 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 PDXDC2PQ6P474 469 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 CEP112Q8N8E3 955 aa20.74■□□□□ 0.91
PCDHA1-202ENST00000394633 RNF225M0QZC1 329 aaPredicted RBP20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 ABL1P00519 1130 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 SERPINB2P05120 415 aa20.73■□□□□ 0.91
PCDHA1-202ENST00000394633 GYG1P46976 350 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms