RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 VSTM4Q8IW00 320 aa21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 USP40Q9NVE5 1235 aa21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 ATP2B4P23634 1241 aa21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 ETF1P62495 437 aaKnown RBP21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 CCZ1BP86790 482 aa21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 CCZ1P86791 482 aaPredicted RBP21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 TRIML1Q8N9V2 468 aa21.2■□□□□ 0.98
SMARCC2-203ENST00000394023 CD209Q9NNX6 404 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 PPP2R2CQ9Y2T4 447 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 PP2D1A8MPX8 630 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 KRT9P35527 623 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 DNA2P51530 1060 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 CABP7Q86V35 215 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 FOXP4Q8IVH2 680 aaPredicted RBP21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 ENOX1Q8TC92 643 aaKnown RBP21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 GUCA1BQ9UMX6 200 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 PCDHA4Q9UN74 947 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 TACC3Q9Y6A5 838 aa21.19■□□□□ 0.98
SMARCC2-203ENST00000394023 POLR3GO15318 223 aaPredicted RBP21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 EARS2Q5JPH6 523 aaKnown RBP21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 REXO1Q8N1G1 1221 aaKnown RBP21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 TMEM47Q9BQJ4 181 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 CDK8P49336 464 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 GPSM2P81274 684 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 KIAA0825Q8IV33 1275 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 SRRTQ9BXP5 876 aaKnown RBP21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 TUBE1Q9UJT0 475 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 SEC23AQ15436 765 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 BPIFA3Q9BQP9 254 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 CUL4BQ13620 913 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 PFKFB3Q16875 520 aaPredicted RBP21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 CSGALNACT2Q8N6G5 542 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 GSDMAQ96QA5 445 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 PIGSQ96S52 555 aa21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 OSBPL5Q9H0X9 879 aaPredicted RBP21.18■□□□□ 0.98
SMARCC2-203ENST00000394023 RPN1P04843 607 aaKnown RBP21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 RAD51AP2Q09MP3 1159 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 PHF20Q9BVI0 1012 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 ZMYND15Q9H091 742 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 MORC3Q14149 939 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 COA7Q96BR5 231 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 MTA3Q9BTC8 594 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 GDAQ9Y2T3 454 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 KRT79Q5XKE5 535 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 CACNA2D4Q7Z3S7 1137 aa21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 ZNF397Q8NF99 534 aaPredicted RBP21.17■□□□□ 0.98
SMARCC2-203ENST00000394023 DGKHQ86XP1 1220 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 CNGA4Q8IV77 575 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 HPSEQ9Y251 543 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 LUC7L2Q9Y383 392 aaKnown RBP21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 ALS2Q96Q42 1657 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 CASP14P31944 242 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 MMRN2Q9H8L6 949 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 QTRT2Q9H974 415 aaKnown RBP21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 LRWD1Q9UFC0 647 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 ZHX1Q9UKY1 873 aaPredicted RBP21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 TEX33O43247 280 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 C12orf60Q5U649 245 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 KRT25Q7Z3Z0 450 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 TBC1D22AQ8WUA7 517 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 SLF1Q9BQI6 1058 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
SMARCC2-203ENST00000394023 GTPBP6O43824 516 aaPredicted RBP21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 VPS72Q15906 364 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 ERCC5P28715 1186 aaPredicted RBP21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 SLC16A2P36021 539 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 TBC1D8BQ0IIM8 1120 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 ZNF579Q8NAF0 562 aaKnown RBP21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 PARP3Q9Y6F1 533 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 KCNJ18B7U540 433 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 ORC4O43929 436 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 RBL2Q08999 1139 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 GPS2Q13227 327 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 KCNJ12Q14500 433 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 E4F1Q66K89 784 aaPredicted RBP21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 DRC1Q96MC2 740 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 PSDA5PKW4 1024 aaPredicted RBP21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 ERICH4A6NGS2 130 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 CCDC40Q4G0X9 1142 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 NBPF11Q86T75 865 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 UBE2Q2Q8WVN8 375 aa21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 CTDP1Q9Y5B0 961 aaPredicted RBP21.15■□□□□ 0.98
SMARCC2-203ENST00000394023 VEGFAP15692 232 aaPredicted RBP21.14■□□□□ 0.98
SMARCC2-203ENST00000394023 SPA17Q15506 151 aa21.14■□□□□ 0.98
SMARCC2-203ENST00000394023 TDRD12Q587J7 1177 aaKnown RBP21.14■□□□□ 0.98
SMARCC2-203ENST00000394023 RCAN1P53805 252 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 CLEC10AQ8IUN9 316 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 CACNB3P54284 484 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 NCBP1Q09161 790 aaKnown RBP21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 NCAPHQ15003 741 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 PRR5LQ6MZQ0 368 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 SV2BQ7L1I2 683 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 TMOD2Q9NZR1 351 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 TBC1D7Q9P0N9 293 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 ANAPC4Q9UJX5 808 aa21.14■□□□□ 0.97
SMARCC2-203ENST00000394023 SOWAHDA6NJG2 315 aa21.13■□□□□ 0.97
SMARCC2-203ENST00000394023 CALCRLQ16602 461 aa21.13■□□□□ 0.97
SMARCC2-203ENST00000394023 DBNDD1Q9H9R9 158 aa21.13■□□□□ 0.97
SMARCC2-203ENST00000394023 TCEAL9Q9UHQ7 104 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms