RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 KCNK3O14649 394 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 RNF40O75150 1001 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 RASA3Q14644 834 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 PAXIP1Q6ZW49 1069 aaPredicted RBP14.5□□□□□ -0.09
LCA5-202ENST00000392959 U2AF1L4Q8WU68 220 aaKnown RBP14.5□□□□□ -0.09
LCA5-202ENST00000392959 COPRSQ9NQ92 184 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 PPP2R5EQ16537 467 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 MAIP1Q8WWC4 291 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 MYO1AQ9UBC5 1043 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 SLC39A14Q15043 492 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 VPS52Q8N1B4 723 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 TGFBRAP1Q8WUH2 860 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 ZSCAN10Q96SZ4 725 aaPredicted RBP14.5□□□□□ -0.09
LCA5-202ENST00000392959 CDC23Q9UJX2 597 aa14.5□□□□□ -0.09
LCA5-202ENST00000392959 ZNF521Q96K83 1311 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 MRPS9P82933 396 aaKnown RBP14.49□□□□□ -0.09
LCA5-202ENST00000392959 ANKRD20A3Q5VUR7 823 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 CACTINQ8WUQ7 758 aaKnown RBP14.49□□□□□ -0.09
LCA5-202ENST00000392959 VCX3BQ9H321 246 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 LGSNQ5TDP6 509 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 PLEKHF1Q96S99 279 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 HOMER3Q9NSC5 361 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 BIN2Q9UBW5 565 aaPredicted RBP14.49□□□□□ -0.09
LCA5-202ENST00000392959 ARMCX3Q9UH62 379 aaPredicted RBP14.49□□□□□ -0.09
LCA5-202ENST00000392959 GOLGA8KD6RF30 607 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 KRIT1O00522 736 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 SLC8A3P57103 927 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 SNX16P57768 344 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 FAM71BQ8TC56 605 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 CDCA7Q9BWT1 371 aaPredicted RBP14.49□□□□□ -0.09
LCA5-202ENST00000392959 ATP8A2Q9NTI2 1148 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 CFBP00751 764 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 ITIH3Q06033 890 aa14.49□□□□□ -0.09
LCA5-202ENST00000392959 KDM3AQ9Y4C1 1321 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 DDX39AO00148 427 aaKnown RBP14.48□□□□□ -0.09
LCA5-202ENST00000392959 ABCB4P21439 1286 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CDC25BP30305 580 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 STX2P32856 288 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 ATP1A2P50993 1020 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CCDC38Q502W7 563 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 RDH13Q8NBN7 331 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CAPS2Q9BXY5 557 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CAPN7Q9Y6W3 813 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 TOM1O60784 492 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 SCG2P13521 617 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CD19P15391 556 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 USH1GQ495M9 461 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 PPP1R13BQ96KQ4 1090 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CYP21A2P08686 494 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 CTSWP56202 376 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 PTGDRQ13258 359 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
LCA5-202ENST00000392959 SRGAP1Q7Z6B7 1085 aa14.48□□□□□ -0.09
LCA5-202ENST00000392959 MYCLP12524 364 aaPredicted RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 TECP42680 631 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 GEN1Q17RS7 908 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 DPCR1Q3MIW9 517 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 GPBP1Q86WP2 473 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 ANKRD42Q8N9B4 389 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 PNMA1Q8ND90 353 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 GSDMAQ96QA5 445 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 ODF2LQ9ULJ1 636 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 GMNNO75496 209 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 RPN1P04843 607 aaKnown RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 OR52Z1P0C646 297 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 PDE11AQ9HCR9 933 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 BUB1O43683 1085 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 RPS8P62241 208 aaKnown RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 PCDHA12Q9UN75 941 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 ABCC2Q92887 1545 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 MAGI2Q86UL8 1455 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 IKBKBO14920 756 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 H2AFZP0C0S5 128 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 CASP14P31944 242 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 COPB1P53618 953 aaKnown RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 H2AFVQ71UI9 128 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 MGARPQ8TDB4 240 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 SDR42E1Q8WUS8 393 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 POLR3EQ9NVU0 708 aa14.47□□□□□ -0.09
LCA5-202ENST00000392959 CPSF2Q9P2I0 782 aaKnown RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 CCNL1Q9UK58 526 aaPredicted RBP14.47□□□□□ -0.09
LCA5-202ENST00000392959 I3L4J1 428 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 ATP8B1O43520 1251 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 RASSF2P50749 326 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 NEK8Q86SG6 692 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.09
LCA5-202ENST00000392959 GOLGA5Q8TBA6 731 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 TBC1D22AQ8WUA7 517 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 SYMPKQ92797 1274 aaKnown RBP14.46□□□□□ -0.09
LCA5-202ENST00000392959 VPS37BQ9H9H4 285 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 RCOR1Q9UKL0 485 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 TTLL7Q6ZT98 887 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 SPATS2Q86XZ4 545 aaKnown RBP14.46□□□□□ -0.09
LCA5-202ENST00000392959 TPH2Q8IWU9 490 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 CPXCR1Q8N123 301 aa14.46□□□□□ -0.09
LCA5-202ENST00000392959 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms