RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NLRP5P59047 1200 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 TNIP1Q15025 636 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 CABP5Q9NP86 173 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 SLURP2P0DP57 97 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 CMA1P23946 247 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 PIBF1Q8WXW3 757 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 CSRNP1Q96S65 589 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.3
SMARCAL1-203ENST00000392128 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 CTAGE5O15320 804 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 CAMK4Q16566 473 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 TMEM179Q6ZVK1 233 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 FMR1NBQ8N0W7 255 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 MKL1Q969V6 931 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 CLRN2A0PK11 232 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 CUTAO60888 179 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 RPS12P25398 132 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 EARS2Q5JPH6 523 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
SMARCAL1-203ENST00000392128 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 STXBP3O00186 592 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 MYO1BO43795 1136 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 FAM83AQ86UY5 434 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 A0A1B0GVL5 298 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 BMP15O95972 392 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 NDUFA8P51970 172 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 ABCB5Q2M3G0 1257 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 SEC63Q9UGP8 760 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-203ENST00000392128 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 M0R2N6 131 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 HPSEQ9Y251 543 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 WNT10BO00744 389 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 PFKFB1P16118 471 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 PTPREP23469 700 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 RESP18Q5W5W9 173 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 SHC4Q6S5L8 630 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-203ENST00000392128 FZD9O00144 591 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 RASSF7Q02833 373 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 ICA1Q05084 483 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 SEPT2Q15019 361 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 PIGSQ96S52 555 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■■■□□ 15.9
SMARCAL1-203ENST00000392128 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 TBC1D12O60347 775 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 GDF11O95390 407 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 TYRO3Q06418 890 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 TTC38Q5R3I4 469 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 PIK3AP1Q6ZUJ8 805 aa13.11□□□□□ -0.31
SMARCAL1-203ENST00000392128 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms