RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 STK35Q8TDR2 534 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 ASAP3Q8TDY4 903 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 EMILIN2Q9BXX0 1053 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 CNNM2Q9H8M5 875 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 BRD7Q9NPI1 651 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 CRTAC1Q9NQ79 661 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 GMIPQ9P107 970 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 DDX20Q9UHI6 824 aaKnown RBP7.89□□□□□ -1.15
TRAV35-201ENST00000390462 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
TRAV35-201ENST00000390462 A0A087WZG4 1122 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 A0A1W2PNR3 127 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 NFKBIEO00221 500 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 TNFRSF10CO14798 259 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 PRODHO43272 600 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 NAT2P11245 290 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 PABPC1P11940 636 aaKnown RBP7.88□□□□□ -1.15
TRAV35-201ENST00000390462 ARNTP27540 789 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 RECQLP46063 649 aaPredicted RBP7.88□□□□□ -1.15
TRAV35-201ENST00000390462 SCNN1BP51168 640 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 CNGB1Q14028 1251 aaPredicted RBP7.88□□□□□ -1.15
TRAV35-201ENST00000390462 SCARA3Q6AZY7 606 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 NSMFQ6X4W1 530 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 NLRC3Q7RTR2 1065 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 FGD2Q7Z6J4 655 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 MEIOBQ8N635 442 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 PARD3BQ8TEW8 1205 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 SKA1Q96BD8 255 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 PNMA5Q96PV4 448 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 SLC52A2Q9HAB3 445 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 ANLNQ9NQW6 1124 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 TOR4AQ9NXH8 423 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 FBXO2Q9UK22 296 aaPredicted RBP7.88□□□□□ -1.15
TRAV35-201ENST00000390462 DMTF1Q9Y222 760 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 GJA3Q9Y6H8 435 aa7.88□□□□□ -1.15
TRAV35-201ENST00000390462 WIZO95785 1651 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 ABHD14A-ACY1A0A1B0GW23 586 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 FAM86C2PA6NEL3 165 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 SLC22A31A6NKX4 558 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 K7ESF4 209 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 EFCAB14O75071 495 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 SETSIPP0DME0 302 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 RARAP10276 462 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 IGFALSP35858 605 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 ZEB1P37275 1124 aaPredicted RBP7.87□□□□□ -1.15
TRAV35-201ENST00000390462 ADCY1Q08828 1119 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 CCINQ13939 588 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 TMEM240Q5SV17 173 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 HYIQ5T013 277 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 CDCA2Q69YH5 1023 aaPredicted RBP7.87□□□□□ -1.15
TRAV35-201ENST00000390462 IQSEC1Q6DN90 963 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 UBE2R2Q712K3 238 aaPredicted RBP7.87□□□□□ -1.15
TRAV35-201ENST00000390462 SRLQ86TD4 932 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 FAM186BQ8IYM0 893 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 CLASRPQ8N2M8 674 aaKnown RBP7.87□□□□□ -1.15
TRAV35-201ENST00000390462 OSBP2Q969R2 916 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 ZCCHC2Q9C0B9 1178 aaKnown RBP7.87□□□□□ -1.15
TRAV35-201ENST00000390462 LRP2BPQ9P2M1 347 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 SAP30BPQ9UHR5 308 aaKnown RBP7.87□□□□□ -1.15
TRAV35-201ENST00000390462 DGKBQ9Y6T7 804 aa7.87□□□□□ -1.15
TRAV35-201ENST00000390462 TNFRSF10AO00220 468 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 LTFP02788 710 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 PSAPP07602 524 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 C6orf222P0C671 652 aaPredicted RBP7.86□□□□□ -1.15
TRAV35-201ENST00000390462 SMPD1P17405 629 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 SOX18P35713 384 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 RENBPP51606 427 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 AK2P54819 239 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 GABREP78334 506 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 INAVAQ3KP66 663 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 CDCP2Q5VXM1 449 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 NGDNQ8NEJ9 315 aaKnown RBP7.86□□□□□ -1.15
TRAV35-201ENST00000390462 SNRNP27Q8WVK2 155 aaKnown RBP7.86□□□□□ -1.15
TRAV35-201ENST00000390462 LRGUKQ96M69 825 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 AIFM3Q96NN9 605 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 PLA2G2EQ9NZK7 142 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 REV1Q9UBZ9 1251 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 POLG2Q9UHN1 485 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 KCNH4Q9UQ05 1017 aa7.86□□□□□ -1.15
TRAV35-201ENST00000390462 RSF1Q96T23 1441 aaPredicted RBP7.86□□□□□ -1.15
TRAV35-201ENST00000390462 ANKRD34BA5PLL1 514 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 M0R2C6 588 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 PDE2AO00408 941 aaPredicted RBP7.85□□□□□ -1.15
TRAV35-201ENST00000390462 ANP32CO43423 234 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 MT-CO1P00395 513 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 ASGR2P07307 311 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 DDIT3P35638 169 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 IARSP41252 1262 aaKnown RBP7.85□□□□□ -1.15
TRAV35-201ENST00000390462 ZNF252P-AS1Q0IIN9 211 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 SLC9A5Q14940 896 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 XRRA1Q6P2D8 792 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 LVRNQ6Q4G3 990 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 SUGP1Q8IWZ8 645 aaKnown RBP7.85□□□□□ -1.15
TRAV35-201ENST00000390462 SCLYQ96I15 445 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 MYD88Q99836 296 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 CLEC4MQ9H2X3 399 aaPredicted RBP7.85□□□□□ -1.15
TRAV35-201ENST00000390462 EFCC1Q9HA90 598 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms