RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 ATF7IPQ6VMQ6 1270 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 TEX11Q8IYF3 940 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 SH3RF3Q8TEJ3 882 aaPredicted RBP9.45□□□□□ -0.9
TRAV6-201ENST00000390428 DEFB118Q96PH6 123 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 PRO3102Q9H379 93 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 AS3MTQ9HBK9 375 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 PAK6Q9NQU5 681 aaPredicted RBP9.45□□□□□ -0.9
TRAV6-201ENST00000390428 LRP2BPQ9P2M1 347 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
TRAV6-201ENST00000390428 TNNQ9UQP3 1299 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 NR2E3Q9Y5X4 410 aa9.45□□□□□ -0.9
TRAV6-201ENST00000390428 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 BCAR3O75815 825 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 BAG3O95817 575 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 PABPC4Q13310 644 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 FRAT1Q92837 279 aaPredicted RBP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 NOL10Q9BSC4 688 aaKnown RBP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 ASCC2Q9H1I8 757 aaPredicted RBP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 DHX36Q9H2U1 1008 aaKnown RBP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 KDM4CQ9H3R0 1056 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 GPR108Q9NPR9 543 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 EVA1BQ9NVM1 165 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 AATFQ9NY61 560 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAV6-201ENST00000390428 PI4KBQ9UBF8 816 aa9.44□□□□□ -0.9
TRAV6-201ENST00000390428 BACE1P56817 501 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 TNNI3KQ59H18 835 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 CCDC158Q5M9N0 1113 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 TTC39AQ5SRH9 613 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 NAA16Q6N069 864 aaPredicted RBP9.43□□□□□ -0.9
TRAV6-201ENST00000390428 ADGRA1Q86SQ6 560 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 FOXP4Q8IVH2 680 aaPredicted RBP9.43□□□□□ -0.9
TRAV6-201ENST00000390428 TMEM57Q8N5G2 664 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 TGFBRAP1Q8WUH2 860 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 WDR18Q9BV38 432 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAV6-201ENST00000390428 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 GJD2Q9UKL4 321 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 FPGT-TNNI3KV9GXZ4 949 aa9.43□□□□□ -0.9
TRAV6-201ENST00000390428 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 FLT1P17948 1338 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 C19orf81C9J6K1 198 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 LILRB3O75022 631 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 HMGCRP04035 888 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 ASNSP08243 561 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 HOXA7P31268 230 aaPredicted RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 WNT7BP56706 349 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 JAG1P78504 1218 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 ATP8B2P98198 1209 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 KCNH2Q12809 1159 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 QPCTQ16769 361 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 ZKSCAN2Q63HK3 967 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 LYPD8Q6UX82 237 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 METTL16Q86W50 562 aaKnown RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 MAPKAPK5Q8IW41 473 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 CYP4X1Q8N118 509 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 SSH3Q8TE77 659 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 PAWRQ96IZ0 340 aaKnown RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 ZNF512BQ96KM6 892 aaPredicted RBP9.42□□□□□ -0.9
TRAV6-201ENST00000390428 MRGPRX2Q96LB1 330 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 DBNDD2Q9BQY9 259 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 MORF4L1Q9UBU8 362 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
TRAV6-201ENST00000390428 RPTORQ8N122 1335 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 A0A1W2PPC1 479 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 IGSF3O75054 1194 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
TRAV6-201ENST00000390428 ZAP70P43403 619 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
TRAV6-201ENST00000390428 OS9Q13438 667 aaPredicted RBP9.41□□□□□ -0.9
TRAV6-201ENST00000390428 NECAB2Q7Z6G3 386 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
TRAV6-201ENST00000390428 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 FAM117AQ9C073 453 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 HMX1Q9NP08 348 aaPredicted RBP9.41□□□□□ -0.9
TRAV6-201ENST00000390428 GINM1Q9NU53 330 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 TMOD4Q9NZQ9 345 aa9.41□□□□□ -0.9
TRAV6-201ENST00000390428 FRMPD3Q5JV73 1810 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 PEX10O60683 326 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 GDF11O95390 407 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 HERVK_113P62684 666 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 SHROOM1Q2M3G4 852 aaPredicted RBP9.4□□□□□ -0.9
TRAV6-201ENST00000390428 CRACR2BQ8N4Y2 399 aaPredicted RBP9.4□□□□□ -0.9
TRAV6-201ENST00000390428 GPRC5AQ8NFJ5 357 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 TRIB2Q92519 343 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 P2RX7Q99572 595 aaKnown RBP9.4□□□□□ -0.9
TRAV6-201ENST00000390428 TXNRD2Q9NNW7 524 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 PIH1D3Q9NQM4 214 aaKnown RBP9.4□□□□□ -0.9
TRAV6-201ENST00000390428 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 DBNLQ9UJU6 430 aaKnown RBP9.4□□□□□ -0.9
TRAV6-201ENST00000390428 ZBTB21Q9ULJ3 1066 aa9.4□□□□□ -0.9
TRAV6-201ENST00000390428 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
TRAV6-201ENST00000390428 SZT2Q5T011 3432 aa9.39□□□□□ -0.91
TRAV6-201ENST00000390428 HLA-DOAP06340 250 aa9.39□□□□□ -0.91
TRAV6-201ENST00000390428 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms