RNA–Protein interactions for RNA: ENST00000390398.3

TRBV25-1-202, Transcript of T cell receptor beta variable 25-1, humanhuman

APPRIS P1 BASIC

Gene TRBV25-1, Length 381 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1-202ENST00000390398 GMCL1P1Q8NEA9 526 aa8.42□□□□□ -1.06
TRBV25-1-202ENST00000390398 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
TRBV25-1-202ENST00000390398 DCPSQ96C86 337 aaKnown RBP8.42□□□□□ -1.06
TRBV25-1-202ENST00000390398 GLIS2Q9BZE0 524 aaPredicted RBP8.42□□□□□ -1.06
TRBV25-1-202ENST00000390398 SYNPO2Q9UMS6 1093 aa8.42□□□□□ -1.06
TRBV25-1-202ENST00000390398 SMCHD1A6NHR9 2005 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 USP2O75604 605 aaPredicted RBP8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 SMARCA1P28370 1054 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 PFKFB3Q16875 520 aaPredicted RBP8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 FOXD4L6Q3SYB3 417 aaPredicted RBP8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 SUPT20HL1Q3ZLR7 823 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 KRT40Q6A162 431 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 FAM173BQ6P4H8 233 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 FOXD4L3Q6VB84 417 aaPredicted RBP8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 KRT26Q7Z3Y9 468 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 USP48Q86UV5 1035 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 SULF1Q8IWU6 871 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 SCYL3Q8IZE3 742 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 DCAF4Q8WV16 495 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 PIBF1Q8WXW3 757 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 WASF1Q92558 559 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 KLRG1Q96E93 195 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 HOOK2Q96ED9 719 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 GBP4Q96PP9 640 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 LZTS2Q9BRK4 669 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 SPZ1Q9BXG8 430 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 UBA5Q9GZZ9 404 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 RIOX1Q9H6W3 641 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 GPCPD1Q9NPB8 672 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 TMX2Q9Y320 296 aa8.41□□□□□ -1.06
TRBV25-1-202ENST00000390398 KIF28PB7ZC32 967 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 POTEIP0CG38 1075 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 POTEJP0CG39 1038 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 SCG2P13521 617 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 AKAP17AQ02040 695 aaKnown RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 KIF23Q02241 960 aaPredicted RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 CCDC96Q2M329 555 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 GPATCH4Q5T3I0 446 aaKnown RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 KCTD1Q719H9 257 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 PNMA8AQ86V59 439 aaPredicted RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 ZKSCAN4Q969J2 545 aaPredicted RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 CDCA5Q96FF9 252 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 GMCL1Q96IK5 515 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 WRNIP1Q96S55 665 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 NUP88Q99567 741 aaPredicted RBP8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 VPS54Q9P1Q0 977 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 KCNJ14Q9UNX9 436 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 RLFQ13129 1914 aa8.4□□□□□ -1.06
TRBV25-1-202ENST00000390398 ADAMTS3O15072 1205 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 RAD21O60216 631 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 MMP1P03956 469 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 BMP3P12645 472 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 SLC16A2P36021 539 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 SLC1A4P43007 532 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 DNM1Q05193 864 aaKnown RBP8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 PRKG1Q13976 671 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 TRIM29Q14134 588 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 NPY5RQ15761 445 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 WWC2Q6AWC2 1192 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 MCTP1Q6DN14 999 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 ADGRF4Q8IZF3 695 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 SPICE1Q8N0Z3 855 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 MTMR8Q96EF0 704 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 PIGSQ96S52 555 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 PHF20Q9BVI0 1012 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 ZSCAN16Q9H4T2 348 aaPredicted RBP8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 VCPKMTQ9H867 229 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 JMJD4Q9H9V9 463 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 VAT1LQ9HCJ6 419 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 GOPCQ9HD26 462 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 ATP6V1DQ9Y5K8 247 aa8.39□□□□□ -1.07
TRBV25-1-202ENST00000390398 COL11A1P12107 1806 aaPredicted RBP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 BTBD18B2RXH4 712 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 USP17L10C9JJH3 530 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 STXBP3O00186 592 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 PPP1R11O60927 126 aaPredicted RBP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 PTPRAP18433 802 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 U2AF2P26368 475 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 DGKZQ13574 1117 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 NBR1Q14596 966 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 ZYXQ15942 572 aaKnown RBP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 BTNL9Q6UXG8 535 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 MOB2Q70IA6 237 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 HOMER1Q86YM7 354 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 DIS3L2Q8IYB7 885 aaKnown RBP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
TRBV25-1-202ENST00000390398 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms